RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RFFLQ8WZ73 363 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 IGSF8Q969P0 613 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PEBP4Q96S96 227 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 EIF3CQ99613 913 aaKnown RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 ABCB8Q9NUT2 735 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 INTUQ9ULD6 942 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 MYO1FO00160 1098 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 LRCH4O75427 683 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 CISD3P0C7P0 127 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 PABPC1P11940 636 aaKnown RBP11.93□□□□□ -0.5
CTSA-209ENST00000493522 MIPP30301 263 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 HLA-FP30511 346 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 CD70P32970 193 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 GJC1P36383 396 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 MPLP40238 635 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 AIF1P55008 147 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 SHC2P98077 582 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 ELF2Q15723 593 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 GEN1Q17RS7 908 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 C2orf27AQ580R0 203 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 ACBD5Q5T8D3 534 aaPredicted RBP11.93□□□□□ -0.5
CTSA-209ENST00000493522 N4BP2L1Q5TBK1 243 aaPredicted RBP11.93□□□□□ -0.5
CTSA-209ENST00000493522 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 KIAA1328Q86T90 577 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 RHOT2Q8IXI1 618 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 NIPA2Q8N8Q9 360 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 RPLP0P6Q8NHW5 317 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 CCDC26Q8TAB7 109 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 WFIKKN2Q8TEU8 576 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 ZC3H10Q96K80 434 aaKnown RBP11.93□□□□□ -0.5
CTSA-209ENST00000493522 NCAPGQ9BPX3 1015 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 SNRNP25Q9BV90 132 aaKnown RBP11.93□□□□□ -0.5
CTSA-209ENST00000493522 OSGEPQ9NPF4 335 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 RXFP3Q9NSD7 469 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 MPP6Q9NZW5 540 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 FBXO10Q9UK96 956 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 FZD10Q9ULW2 581 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 AP4E1Q9UPM8 1137 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 SLC27A6Q9Y2P4 619 aa11.93□□□□□ -0.5
CTSA-209ENST00000493522 SPAG17Q6Q759 2223 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.92□□□□□ -0.5
CTSA-209ENST00000493522 PRRT4C9JH25 899 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 K7EQS6 105 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 TM4SF5O14894 197 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 CREB3O43889 395 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 CNTN5O94779 1100 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 PROSCO94903 275 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 TIE1P35590 1138 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 TNFRSF4P43489 277 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 LMAN2Q12907 356 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZNF177Q13360 481 aaPredicted RBP11.92□□□□□ -0.5
CTSA-209ENST00000493522 MESDQ14696 234 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ACAP1Q15027 740 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ALFQ53S48 1182 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
CTSA-209ENST00000493522 TFAP2DQ7Z6R9 452 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZNF683Q8IZ20 524 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 AHI1Q8N157 1196 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 PYROXD2Q8N2H3 581 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ARFGAP1Q8N6T3 406 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZNF513Q8N8E2 541 aaPredicted RBP11.92□□□□□ -0.5
CTSA-209ENST00000493522 CCDC112Q8NEF3 446 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 FIBINQ8TAL6 211 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 SLC35G2Q8TBE7 412 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 UCMAQ8WVF2 138 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ACDQ96AP0 544 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 TBC1D31Q96DN5 1066 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 C1orf74Q96LT6 269 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 HHIPQ96QV1 700 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 EPAS1Q99814 870 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 DESI2Q9BSY9 194 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 MAGEB5Q9BZ81 275 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 CIPCQ9C0C6 399 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZYG11BQ9C0D3 744 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 OSBPL2Q9H1P3 480 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 DHX35Q9H5Z1 703 aaKnown RBP11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZWILCHQ9H900 591 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ZDHHC4Q9NPG8 344 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 OR12D3Q9UGF7 316 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 LCMT1Q9UIC8 334 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 TFR2Q9UP52 801 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 ANKRD36A6QL64 1941 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 CEP192Q8TEP8 1941 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
CTSA-209ENST00000493522 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
CTSA-209ENST00000493522 ANTXRLA6NF34 631 aa11.91□□□□□ -0.5
CTSA-209ENST00000493522 FAM72CH0Y354 149 aa11.91□□□□□ -0.5
CTSA-209ENST00000493522 NRDCO43847 1150 aa11.91□□□□□ -0.5
CTSA-209ENST00000493522 CLDN11O75508 207 aa11.91□□□□□ -0.5
CTSA-209ENST00000493522 MTA2O94776 668 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms