RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 ANAPC16Q96DE5 110 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 TRAPPC9Q96Q05 1148 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 PDGFCQ9NRA1 345 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 FAM49BQ9NUQ9 324 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 RBPJLQ9UBG7 517 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 ADAM28Q9UKQ2 775 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 DNAJC16Q9Y2G8 782 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 SCN1AP35498 2009 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
TSC1-207ENST00000493467 PROCP04070 461 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 PRKCGP05129 697 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 KITP10721 976 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 POLR2AP24928 1970 aaKnown RBP9.94□□□□□ -0.82
TSC1-207ENST00000493467 NOS2P35228 1153 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 ARL4AP40617 200 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 HARS2P49590 506 aaKnown RBP9.94□□□□□ -0.82
TSC1-207ENST00000493467 RPL10AP62906 217 aaKnown RBP9.94□□□□□ -0.82
TSC1-207ENST00000493467 KDSRQ06136 332 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 TRIP11Q15643 1979 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 SOWAHAQ2M3V2 549 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 CRYBG2Q8N1P7 616 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 COLGALT1Q8NBJ5 622 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 BEST2Q8NFU1 509 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 OR6Y1Q8NGX8 325 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 PPP1R14CQ8TAE6 165 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 HSFY1Q96LI6 401 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 RILPQ96NA2 401 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 THTPAQ9BU02 230 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 B3GNT5Q9BYG0 378 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 YIPF3Q9GZM5 350 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 NDE1Q9NXR1 346 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.94□□□□□ -0.82
TSC1-207ENST00000493467 DLGAP2Q9P1A6 1054 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 IGSF9Q9P2J2 1179 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 FZD10Q9ULW2 581 aa9.94□□□□□ -0.82
TSC1-207ENST00000493467 A0A088AWK7 358 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 PPEF2O14830 753 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 ITM2AO43736 263 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 MFSD11O43934 449 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 DAB1O75553 588 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 DXOO77932 396 aaKnown RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 ITGA2BP08514 1039 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 CCDC130P13994 396 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 PRDX6P30041 224 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 GARSP41250 739 aaKnown RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 ATXN1P54253 815 aaKnown RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 DSG1Q02413 1049 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 SPANXN3Q5MJ09 141 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 POTEHQ6S545 545 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 ARMCX2Q7L311 632 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 BNIPLQ7Z465 357 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 ERO1BQ86YB8 467 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 GPC2Q8N158 579 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 PPTC7Q8NI37 304 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 CLEC4CQ8WTT0 213 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 JADE3Q92613 823 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 SLC39A13Q96H72 371 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 EAF1Q96JC9 268 aaPredicted RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 CLMNQ96JQ2 1002 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 PPP1R16BQ96T49 567 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 SORT1Q99523 831 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 PDP2Q9P2J9 529 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 APOBEC2Q9Y235 224 aaKnown RBP9.93□□□□□ -0.82
TSC1-207ENST00000493467 TSC2P49815 1807 aa9.93□□□□□ -0.82
TSC1-207ENST00000493467 EIF4E1BA6NMX2 242 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 RNF103O00237 685 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 ZNF195O14628 629 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 BUD23O43709 281 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 LYPLA1O75608 230 aaPredicted RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 C6orf222P0C671 652 aaPredicted RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 GOT1P17174 413 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 MGAT1P26572 445 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 GP5P40197 560 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 IREB2P48200 963 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 CDK7P50613 346 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 DEUP1Q05D60 604 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 HNRNPDQ14103 355 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 PAFAH1B3Q15102 231 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 CCDC153Q494R4 210 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 EFHC1Q5JVL4 640 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 TAPT1Q6NXT6 567 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 PGM2L1Q6PCE3 622 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 MAMDC4Q6UXC1 1216 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 MAVSQ7Z434 540 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 LIMS2Q7Z4I7 341 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 UNC5BQ8IZJ1 945 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 FAM160A2Q8N612 972 aaPredicted RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 ZNF483Q8TF39 744 aaPredicted RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 CLPTM1LQ96KA5 538 aa9.92□□□□□ -0.82
TSC1-207ENST00000493467 ZMAT2Q96NC0 199 aaKnown RBP9.92□□□□□ -0.82
TSC1-207ENST00000493467 CPNE1Q99829 537 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms