RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 TNFSF13BQ9Y275 285 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 PTPN1P18031 435 aaKnown RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 VMP1Q96GC9 406 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 OXNAD1Q96HP4 312 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 BBS4Q96RK4 519 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 APBA2Q99767 749 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 OSBPL6Q9BZF3 934 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 FBXO10Q9UK96 956 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 DNPEPQ9ULA0 475 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 DUSP12Q9UNI6 340 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 TDRKHQ9Y2W6 561 aaKnown RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 ARHGAP23Q9P227 1491 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 PTPRAP18433 802 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 ATP5C1P36542 298 aaKnown RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 IL5RAQ01344 420 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 C16orf72Q14CZ0 275 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 DDR2Q16832 855 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 SETMARQ53H47 684 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 CASP12Q6UXS9 341 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 SETD9Q8NE22 299 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 ADAM32Q8TC27 787 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 MAGEB10Q96LZ2 347 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-206ENST00000493232 SLC25A23Q9BV35 468 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 CDHR5Q9HBB8 845 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 OPTCQ9UBM4 332 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
BRAT1-206ENST00000493232 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 FCHO1O14526 889 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 FAM228AQ86W67 206 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 SUSD6Q92537 303 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 HSFY1Q96LI6 401 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 IL22Q9GZX6 179 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 KLHL3Q9UH77 587 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ANKRD63C9JTQ0 380 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 KPNA3O00505 521 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 IFNGR2P38484 337 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 NAA20P61599 178 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 DPYSL3Q14195 570 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 SLC45A4Q5BKX6 768 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 LRRC38Q5VT99 294 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ANKZF1Q9H8Y5 726 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CATSPERZQ9NTU4 200 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CYP7B1O75881 506 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 LDLRP01130 860 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CATP04040 527 aaKnown RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 SSTR1P30872 391 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 PSEN1P49768 467 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CNGA2Q16280 664 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ZFP1Q6P2D0 407 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 IZUMO2Q6UXV1 221 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 USP7Q93009 1102 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 GAD1Q99259 594 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 BCL9O00512 1426 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 SIGLEC16A6NMB1 481 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 TRIM24O15164 1050 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 SPTLC1O15269 473 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CHADO15335 359 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ADCY6O43306 1168 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ATG7O95352 703 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CLPTM1O96005 669 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 MT-CO1P00395 513 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 KDELR1P24390 212 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 NUP62P37198 522 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 CRY1Q16526 586 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 MEA1Q16626 185 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 C1orf186Q6ZWK4 172 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 RD3Q7Z3Z2 195 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 MAGED4Q96JG8 741 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 TLR10Q9BXR5 811 aa16.59■□□□□ 0.25
BRAT1-206ENST00000493232 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-206ENST00000493232 ETS1P14921 441 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 RAB14P61106 215 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 PCID2Q5JVF3 399 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 CATSPERGQ6ZRH7 1159 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 VSIG10LQ86VR7 867 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 GPSM1Q86YR5 675 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 TRPC4APQ8TEL6 797 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 APOL4Q9BPW4 351 aa16.58■□□□□ 0.25
BRAT1-206ENST00000493232 ABCB1P08183 1280 aaPredicted RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 IL2P60568 153 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 VN1R5Q7Z5H4 357 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 PGM2Q96G03 612 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 BTBD10Q9BSF8 475 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 UNKQ9C0B0 810 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 CEP44Q9C0F1 390 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 NRDE2Q9H7Z3 1164 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 WBP4O75554 376 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms