RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NUGGCQ68CJ6 796 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 TPGS2Q68CL5 300 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 UNC5AQ6ZN44 842 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 C14orf80Q86SX3 495 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 CMTR2Q8IYT2 770 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SLC39A11Q8N1S5 342 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ZSCAN18Q8TBC5 510 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 OVCA2Q8WZ82 227 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 CHMP6Q96FZ7 201 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 TEKT5Q96M29 485 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 CLSTN3Q9BQT9 956 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 RC3H2Q9HBD1 1191 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SMG5Q9UPR3 1016 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 MAD1L1Q9Y6D9 718 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 IQANK1A0A1B0GTG1 560 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 FAM47DPA6NHR8 397 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 DFFAO00273 331 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ABLIM3O94929 683 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 TBX18O95935 607 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 JCHAINP01591 159 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 RHOQP17081 205 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 LAG3P18627 525 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 CD68P34810 354 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 DSG1Q02413 1049 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 MS4A13Q5J8X5 152 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 SNX30Q5VWJ9 437 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 STEAP4Q687X5 459 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 LRRC6Q86X45 466 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF683Q8IZ20 524 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 PDZD8Q8NEN9 1154 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF461Q8TAF7 563 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF473Q8WTR7 871 aaKnown RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 DEPDC1BQ8WUY9 529 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 MRRFQ96E11 262 aaKnown RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 TMEM169Q96HH4 297 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 SGSM3Q96HU1 749 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 AGAP3Q96P47 875 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF317Q96PQ6 595 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 PRMT1Q99873 361 aaKnown RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 HERC2P3Q9BVR0 1158 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 SLC39A8Q9C0K1 460 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 RABEP2Q9H5N1 569 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 PLAC1Q9HBJ0 212 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 PRDM5Q9NQX1 630 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF180Q9UJW8 692 aa14.38□□□□□ -0.11
PTPN7-216ENST00000492977 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 IGLV3-10A0A075B6K4 115 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 TRIM43BA6NCK2 446 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 F5H423 210 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 AP3B1O00203 1094 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 MATN3O15232 486 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 TLR5O60602 858 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 MAFKO60675 156 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 C1QAP02745 245 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 INHBAP08476 426 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 CCNB1P14635 433 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 GBP2P32456 591 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 CCT5P48643 541 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 MPP2Q14168 576 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 PRPSAP1Q14558 356 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 KCTD11Q693B1 232 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 SLC26A11Q86WA9 606 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 CNPY4Q8N129 248 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 UMODL1-AS1Q8N2C9 162 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 MPP5Q8N3R9 675 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 DYDC1Q8WWB3 177 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 TRIM43Q96BQ3 446 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 ALKBH8Q96BT7 664 aaKnown RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 PPP1R2P1Q96PQ5 205 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 GORASP1Q9BQQ3 440 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 ZYG11BQ9C0D3 744 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 SPG21Q9NZD8 308 aa14.37□□□□□ -0.11
PTPN7-216ENST00000492977 HBS1LQ9Y450 684 aaKnown RBP14.37□□□□□ -0.11
PTPN7-216ENST00000492977 ARHGAP42A6NI28 874 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 FAM159BA6NKW6 160 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 EBAG9O00559 213 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 C2CD2LO14523 706 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 CACNG3O60359 315 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 CSH1P0DML2 217 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 CSH2P0DML3 217 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 CSF2RAP15509 400 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 NDST2P52849 883 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms