RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 FNDC3BQ53EP0 1204 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 PSTKQ8IV42 348 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 PGBD3Q8N328 593 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 NIPA2Q8N8Q9 360 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 OR52K2Q8NGK3 314 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 PEBP4Q96S96 227 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 GABRG3Q99928 467 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 FEM1AQ9BSK4 669 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 SNRNP25Q9BV90 132 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 RETREG1Q9H6L5 497 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 ZSCAN32Q9NX65 697 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 VPS28Q9UK41 221 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 RAD54BQ9Y620 910 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 TCRBV21S2A2A0A5A6 115 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 DAPK3O43293 454 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 PROSCO94903 275 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 EPHX1P07099 455 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 HOXA6P31267 233 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 NNMTP40261 264 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 FNTBP49356 437 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 TPI1P60174 286 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 ECT2LQ008S8 904 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 SULT2A1Q06520 285 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 DMWDQ09019 674 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 CA9Q16790 459 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 PTPRNQ16849 979 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 ARTNQ5T4W7 220 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 ZC3H14Q6PJT7 736 aaKnown RBP14.35□□□□□ -0.11
CCM2-217ENST00000492883 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 LONP2Q86WA8 852 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 HSPH1Q92598 858 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 SPON2Q9BUD6 331 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 CATSPERBQ9H7T0 1116 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 BCCIPQ9P287 314 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCM2-217ENST00000492883 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 ERVW-1Q9UQF0 538 aa14.35□□□□□ -0.11
CCM2-217ENST00000492883 A0A0D9SEW6 157 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 A0A1W2PQF6 199 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 ILVBLA1L0T0 632 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 EEF2KO00418 725 aaKnown RBP14.34□□□□□ -0.11
CCM2-217ENST00000492883 AXIN1O15169 862 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 SRPRAP08240 638 aaKnown RBP14.34□□□□□ -0.11
CCM2-217ENST00000492883 RARAP10276 462 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 TDGF1P13385 188 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 HLA-EP13747 358 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 TCF4P15884 667 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 IL1R2P27930 398 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 HTR7P34969 479 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 ARHGAP25P42331 645 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 CTSOP43234 321 aaPredicted RBP14.34□□□□□ -0.11
CCM2-217ENST00000492883 MAPKAPK2P49137 400 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 KRT83P78385 493 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
CCM2-217ENST00000492883 ZNF783Q6ZMS7 281 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 NLRP14Q86W24 1093 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 ALG14Q96F25 216 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 RPL10LQ96L21 214 aaKnown RBP14.34□□□□□ -0.11
CCM2-217ENST00000492883 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 TMEM248Q9NWD8 314 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 SUN2Q9UH99 717 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 PCDHGA2Q9Y5H1 932 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 OR51B4Q9Y5P0 310 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 R4GN57 208 aa14.34□□□□□ -0.11
CCM2-217ENST00000492883 CCDC163A0A0D9SF12 145 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 MTA2O94776 668 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 PRKCHP24723 683 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 GJC1P36383 396 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 GNA12Q03113 381 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 SEMA3BQ13214 749 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ENPP2Q13822 863 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 TCEAL1Q15170 157 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 KIAA1211LQ6NV74 962 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 CYP4V2Q6ZWL3 525 aaPredicted RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 WDR5BQ86VZ2 330 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 TMEM139Q8IV31 216 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ZNF366Q8N895 744 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 RTL3Q8N8U3 475 aaKnown RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 OR7D4Q8NG98 312 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 TEKT4Q8WW24 435 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 HMGB4Q8WW32 186 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ANP32BQ92688 251 aaKnown RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 NELL1Q92832 810 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 MRGPRX3Q96LB0 322 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 KCTD15Q96SI1 283 aaPredicted RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 C2orf49Q9BVC5 232 aaPredicted RBP14.33□□□□□ -0.12
CCM2-217ENST00000492883 TMEM245Q9H330 911 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms