RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TGM5O43548 720 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MED24O75448 989 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RHBDL1O75783 438 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PSMD10O75832 226 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RNF8O76064 485 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 KCNK5O95279 499 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 GDF11O95390 407 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PIGNO95427 931 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 VNN2O95498 520 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 IGHEP01854 428 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF735P0CB33 412 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CALM1P0DP23 149 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CALM2P0DP24 149 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CALM3P0DP25 149 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MYBL1P10243 752 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RALBP11234 206 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ETS1P14921 441 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CPB1P15086 417 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 HOXB8P17481 243 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RXRAP19793 462 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CYP2A7P20853 494 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CPT2P23786 658 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ADRA1DP25100 572 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PTPN3P26045 913 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 AOAHP28039 575 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CST5P28325 142 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RRM2P31350 389 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CHRNA7P36544 502 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PSMB10P40306 273 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MAGEA1P43355 309 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CDKN1BP46527 198 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 GABRB2P47870 512 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 KCNJ5P48544 419 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ALDH7A1P49419 539 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 HSD17B4P51659 736 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PNLIPRP1P54315 467 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 EPHB4P54760 987 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 POLE2P56282 527 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PSMA6P60900 246 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RAB14P61106 215 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 S100A12P80511 92 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ROR2Q01974 943 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PTSQ03393 145 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SPIRE1Q08AE8 756 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 LCP2Q13094 533 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 NOGQ13253 232 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PTK6Q13882 451 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 NTRK3Q16288 839 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 KYAT1Q16773 422 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD20A4Q4UJ75 823 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD20A8PQ5CZ79 823 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 HERC4Q5GLZ8 1057 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 INTS6LQ5JSJ4 861 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RNFT1Q5M7Z0 435 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD20A2Q5SQ80 823 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SAPCD1Q5SSQ6 148 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD20A1Q5TYW2 823 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ANKRD20A3Q5VUR7 823 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PLA2G4FQ68DD2 849 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ETFRF1Q6IPR1 90 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 FBXO38Q6PIJ6 1188 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 FAM111BQ6SJ93 734 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CHST3Q7LGC8 479 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 KRT28Q7Z3Y7 464 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MAPKAPK5Q8IW41 473 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 FAM181AQ8N9Y4 354 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 POGLUT1Q8NBL1 392 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SETD9Q8NE22 299 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 OR2T34Q8NGX1 318 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CFAP61Q8NHU2 1237 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 BAHD1Q8TBE0 780 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SEC14L1Q92503 715 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PTPRN2Q92932 1015 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 TESK2Q96S53 571 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 KCTD15Q96SI1 283 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 NEU1Q99519 415 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 OSMRQ99650 979 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RBM4BQ9BQ04 359 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MTG1Q9BT17 334 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ZSCAN5AQ9BUG6 496 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 RBM4Q9BWF3 364 aaKnown RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 TBC1D10AQ9BXI6 508 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 HEMGNQ9BXL5 484 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MIR1-1HGQ9H1L0 117 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CENPHQ9H3R5 247 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PARVBQ9HBI1 364 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MAGEE1Q9HCI5 957 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 CABP5Q9NP86 173 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 SLC35C2Q9NQQ7 365 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 LATS2Q9NRM7 1088 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 DBF4Q9UBU7 674 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ATP6V1HQ9UI12 483 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 MINPP1Q9UNW1 487 aa4.33□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF148Q9UQR1 794 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms