RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 CYP4F3Q08477 520 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 KCNH2Q12809 1159 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 SOWAHCQ53LP3 525 aaPredicted RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 ZC3H12AQ5D1E8 599 aaKnown RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 PRAMEF14Q5SWL7 426 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 KLHL10Q6JEL2 608 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 DHRS13Q6UX07 377 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 RBM43Q6ZSC3 357 aaKnown RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 CHSY1Q86X52 802 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 GATAD2AQ86YP4 633 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 TRIM59Q8IWR1 403 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 PDCD7Q8N8D1 485 aaKnown RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 SAP25Q8TEE9 199 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 HNRNPLLQ8WVV9 542 aaKnown RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 NELFBQ8WX92 580 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 FAM131CQ96AQ9 280 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 BTN2A3PQ96KV6 586 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 POPDC2Q9HBU9 364 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 TJP2Q9UDY2 1190 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 CYTH4Q9UIA0 394 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 TPX2Q9ULW0 747 aaKnown RBP20.55■□□□□ 0.88
NELFE-212ENST00000492539 PCDHGA1Q9Y5H4 931 aa20.55■□□□□ 0.88
NELFE-212ENST00000492539 DOCK9Q9BZ29 2069 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 BICDL2A1A5D9 508 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 E9PAM4 449 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 WNT9AO14904 365 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 TRUB2O95900 331 aaKnown RBP20.54■□□□□ 0.88
NELFE-212ENST00000492539 GOT1P17174 413 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 C5AR1P21730 350 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 MZF1P28698 734 aaPredicted RBP20.54■□□□□ 0.88
NELFE-212ENST00000492539 PAK1Q13153 545 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 SLC12A1Q13621 1099 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 TMEM110Q86TL2 294 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 TMPRSS12Q86WS5 348 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 STK40Q8N2I9 435 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 MLKLQ8NB16 471 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 RPL10LQ96L21 214 aaKnown RBP20.54■□□□□ 0.88
NELFE-212ENST00000492539 PRMT1Q99873 361 aaKnown RBP20.54■□□□□ 0.88
NELFE-212ENST00000492539 AASDHPPTQ9NRN7 309 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 CTNND2Q9UQB3 1225 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 CEP83Q9Y592 693 aa20.54■□□□□ 0.88
NELFE-212ENST00000492539 ARID1BQ8NFD5 2236 aaPredicted RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 E5RJQ4 531 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 YKT6O15498 198 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 DRD3P35462 400 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 STK19P49842 368 aaPredicted RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 PITX1P78337 314 aaPredicted RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 ELAVL3Q14576 367 aaKnown RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 RNF219Q5W0B1 726 aaPredicted RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 OR14C36Q8NHC7 312 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 INTS2Q9H0H0 1204 aaKnown RBP20.53■□□□□ 0.88
NELFE-212ENST00000492539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.53■□□□□ 0.88
NELFE-212ENST00000492539 MYLKQ15746 1914 aa20.53■□□□□ 0.88
NELFE-212ENST00000492539 A0A087WV48 116 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 KCNU1A8MYU2 1149 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 F5H5T6 163 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 ENC1O14682 589 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 MED7O43513 233 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 LATO43561 262 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 AFPP02771 609 aaKnown RBP20.52■□□□□ 0.88
NELFE-212ENST00000492539 ITGAVP06756 1048 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 KRT5P13647 590 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 PTMSP20962 102 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 EPHA8P29322 1005 aaPredicted RBP20.52■□□□□ 0.88
NELFE-212ENST00000492539 PLK1P53350 603 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 NXPH1P58417 271 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 PPP2CBP62714 309 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 YWHAZP63104 245 aaKnown RBP20.52■□□□□ 0.88
NELFE-212ENST00000492539 PPP2CAP67775 309 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 CCDC157Q569K6 752 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 CCDC183Q5T5S1 534 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
NELFE-212ENST00000492539 ATP6V0D2Q8N8Y2 350 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 CNDP2Q96KP4 475 aaKnown RBP20.52■□□□□ 0.88
NELFE-212ENST00000492539 MED15Q96RN5 788 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 THAP9Q9H5L6 903 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 GDF3Q9NR23 364 aa20.52■□□□□ 0.88
NELFE-212ENST00000492539 LETM1O95202 739 aaPredicted RBP20.51■□□□□ 0.87
NELFE-212ENST00000492539 LDOC1O95751 146 aaPredicted RBP20.51■□□□□ 0.87
NELFE-212ENST00000492539 GNA14O95837 355 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 IL1BP01584 269 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 VAV1P15498 845 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 PDGFRAP16234 1089 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 ABCB4P21439 1286 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 NNMTP40261 264 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 VASPP50552 380 aaPredicted RBP20.51■□□□□ 0.87
NELFE-212ENST00000492539 SULT2A1Q06520 285 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 PDCLQ13371 301 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 TTC39BQ5VTQ0 682 aaPredicted RBP20.51■□□□□ 0.87
NELFE-212ENST00000492539 CXorf57Q6NSI4 855 aaKnown RBP20.51■□□□□ 0.87
NELFE-212ENST00000492539 FRS2Q8WU20 508 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 SERAC1Q96JX3 654 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 SPAG5Q96R06 1193 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 ERVMER34-1Q9H9K5 563 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 RWDD2AQ9UIY3 292 aa20.51■□□□□ 0.87
NELFE-212ENST00000492539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.51■□□□□ 0.87
NELFE-212ENST00000492539 A0A1B0GVM2 712 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 TCAF2A6NFQ2 919 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 TLR4O00206 839 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms