RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 MAPK8P45983 427 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 PTP4A2Q12974 167 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 E2F5Q15329 346 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 HNRNPA1L2Q32P51 320 aaKnown RBP12.15□□□□□ -0.46
MDC1-207ENST00000492462 SLC25A52Q3SY17 297 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ALFQ53S48 1182 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 SH3PXD2AQ5TCZ1 1133 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 BNIPLQ7Z465 357 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ZNF677Q86XU0 584 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
MDC1-207ENST00000492462 ZNF557Q8N988 423 aaPredicted RBP12.15□□□□□ -0.46
MDC1-207ENST00000492462 OR2I1PQ8NGU4 316 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ALG14Q96F25 216 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 PGAP3Q96FM1 320 aaPredicted RBP12.15□□□□□ -0.46
MDC1-207ENST00000492462 WDCPQ9H6R7 721 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 IGSF5Q9NSI5 407 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ANGPTL2Q9UKU9 493 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 STAP1Q9ULZ2 295 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 SLCO1B1Q9Y6L6 691 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 C7P10643 843 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 ACADMP11310 421 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 ENGP17813 658 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 PLK1P53350 603 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 ST8SIA6P61647 398 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 ATP11AP98196 1134 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 ECT2LQ008S8 904 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 C5orf22Q49AR2 442 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 C9orf64Q5T6V5 341 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 SLC23A3Q6PIS1 610 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 RGL4Q8IZJ4 473 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 BPIFA3Q9BQP9 254 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 MAGEB5Q9BZ81 275 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 RSPH9Q9H1X1 276 aaPredicted RBP12.14□□□□□ -0.47
MDC1-207ENST00000492462 C6orf106Q9H6K1 298 aaPredicted RBP12.14□□□□□ -0.47
MDC1-207ENST00000492462 CAPN10Q9HC96 672 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 TMEM9BQ9NQ34 198 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
MDC1-207ENST00000492462 RRN3Q9NYV6 651 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 SLC6A14Q9UN76 642 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 NBEAQ8NFP9 2946 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 BPTFQ12830 3046 aa12.14□□□□□ -0.47
MDC1-207ENST00000492462 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
MDC1-207ENST00000492462 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 MEI4A8MW99 385 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 MOCS3O95396 460 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 SRPRAP08240 638 aaKnown RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 OXTRP30559 389 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 ZNF165P49910 485 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 ZNF177Q13360 481 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 IQCB1Q15051 598 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 CDO1Q16878 200 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 DUOXA1Q1HG43 343 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 UAP1L1Q3KQV9 507 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 BRMS1LQ5PSV4 323 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 TTC39BQ5VTQ0 682 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 DCAF12L1Q5VU92 463 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 RNF219Q5W0B1 726 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 TRIM72Q6ZMU5 477 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 STK40Q8N2I9 435 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 ZCCHC9Q8N567 271 aaKnown RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 RXFP2Q8WXD0 754 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 BAP1Q92560 729 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 FAM129BQ96TA1 746 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 AGPAT1Q99943 283 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 FEM1AQ9BSK4 669 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 NUSAP1Q9BXS6 441 aaKnown RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 SEPT11Q9NVA2 429 aaKnown RBP12.13□□□□□ -0.47
MDC1-207ENST00000492462 MPP6Q9NZW5 540 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 DAAM1Q9Y4D1 1078 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 OR51B4Q9Y5P0 310 aa12.13□□□□□ -0.47
MDC1-207ENST00000492462 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 SYCE3A1L190 88 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 DRGXA6NNA5 263 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 METTL12A8MUP2 240 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 GIPC1O14908 333 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 SNAP91O60641 907 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 CLDN11O75508 207 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 ENDOD1O94919 500 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 KCNK5O95279 499 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 F9P00740 461 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 DNTTP04053 509 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 PROS1P07225 676 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 SERPINF2P08697 491 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 RDXP35241 583 aaKnown RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 RFC1P35251 1148 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms