RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ARRDC3Q96B67 414 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 CCDC17Q96LX7 622 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 HS6ST2Q96MM7 605 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF347Q96SE7 839 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 EIF2AK1Q9BQI3 630 aaKnown RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 SH2D3AQ9BRG2 576 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TFCP2L1Q9NZI6 479 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 DERAQ9Y315 318 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 SPATA31A5Q5VU36 1347 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 SPATA31A7Q8IWB4 1347 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 VWA3AA6NCI4 1184 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 SOCS2O14508 198 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 GCATO75600 419 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 ALDOAP04075 364 aaKnown RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 MT3P25713 68 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PNPLA4P41247 253 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 MCM2P49736 904 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TUBP50607 506 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PAPOLAP51003 745 aaKnown RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 RBM5P52756 815 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 CDK18Q07002 472 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 SEMA3AQ14563 771 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 CEP78Q5JTW2 689 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMEM63BQ5T3F8 832 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 VSTM1Q6UX27 236 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 SERPINA13PQ6UXR4 307 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 RHPN2Q8IUC4 686 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMEM57Q8N5G2 664 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRSS3P2Q8NHM4 247 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 USP13Q92995 863 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 ASB2Q96Q27 587 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 FCRL5Q96RD9 977 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PIGSQ96S52 555 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 REEP2Q9BRK0 252 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 HTATIP2Q9BUP3 242 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PHF7Q9BWX1 381 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 HDHD5Q9BXW7 423 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRSS22Q9GZN4 317 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 NUAK2Q9H093 628 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 OSBPL5Q9H0X9 879 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 IL21RQ9HBE5 538 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 PDE11AQ9HCR9 933 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TXNRD2Q9NNW7 524 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TXLNGQ9NUQ3 528 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMLHEQ9NVH6 421 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 HDAC6Q9UBN7 1215 aa3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 HEMK1Q9Y5R4 338 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P30-201ENST00000492455 FAM90A10PA6NDY2 464 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 HNRNPRO43390 633 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 DHX16O60231 1041 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 ALDOCP09972 364 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 ARSAP15289 507 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 HOXA7P31268 230 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 YPEL5P62699 121 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZBTB16Q05516 673 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 CHRNDQ07001 517 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC12A1Q13621 1099 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 THOC5Q13769 683 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 TRIP6Q15654 476 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 TAF12Q16514 161 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 CTXN3Q4LDR2 81 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 ALFQ53S48 1182 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 ANKRD45Q5TZF3 282 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 RINLQ6ZS11 566 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 Q6ZTC4 211 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 MRPL10Q7Z7H8 261 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 FSIP1Q8NA03 581 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 OR52N4Q8NGI2 321 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 FAM110DQ8TAY7 271 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 C2CD4CQ8TF44 421 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 MAP4K1Q92918 833 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 TRIM63Q969Q1 353 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 MAELQ96JY0 434 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBATAQ96M53 351 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 SENP7Q9BQF6 1050 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 EFHD1Q9BUP0 239 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 FRMD8Q9BZ67 464 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 CLPBQ9H078 707 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRDM16Q9HAZ2 1276 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 IFT80Q9P2H3 777 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 PI4KBQ9UBF8 816 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 CRYL1Q9Y2S2 319 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 RRP7AQ9Y3A4 280 aaKnown RBP3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 PKP3Q9Y446 797 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 LMTK3Q96Q04 1460 aa3.22□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC22A23A1A5C7 686 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 FAM90A7PA6NKC0 464 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 FAM90A22PA8MWA6 464 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 FAM90A12PA8MX19 464 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 FAM90A23PA8MXZ1 464 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 TTC34A8MYJ7 566 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 TMEM232C9JQI7 657 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 UBE2Q2LH0YL09 131 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 NPHP1O15259 732 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 HOXC11O43248 304 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 SGPL1O95470 568 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 ST6GAL1P15907 406 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms