RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 DRAP1Q14919 205 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SHBQ15464 509 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 HNRNPA1L2Q32P51 320 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 ZNF776Q68DI1 518 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 LINGO4Q6UY18 593 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 NOP9Q86U38 636 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 EMC1Q8N766 993 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 CADM4Q8NFZ8 388 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 MDM1Q8TC05 714 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 FRS2Q8WU20 508 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 ZCCHC14Q8WYQ9 949 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 RNF34Q969K3 372 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SLC2A13Q96QE2 648 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 TBCBQ99426 244 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 PSMB7Q99436 277 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 BTBD1Q9H0C5 482 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 MPP6Q9NZW5 540 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 ANKRD6Q9Y2G4 727 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 DOCK4Q8N1I0 1966 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 A0A0D9SEW6 157 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 SRRM3A6NNA2 597 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 F5H5T6 163 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 PES1O00541 588 aaKnown RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 MED7O43513 233 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 SMAD6O43541 496 aaKnown RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 IL1BP01584 269 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 CAPNS1P04632 268 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 CTSLP07711 333 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 GNSP15586 552 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 OXTRP30559 389 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 FLT3P36888 993 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 MATKP42679 507 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 ACADSBP45954 432 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 SULT1E1P49888 294 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 ECT2LQ008S8 904 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 MYLKQ15746 1914 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 MAN2A1Q16706 1144 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 ACCSLQ4AC99 568 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 VWA3BQ502W6 1294 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 MPP7Q5T2T1 576 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 RNF219Q5W0B1 726 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 KIAA0895LQ68EN5 471 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 LEKR1Q6ZMV7 388 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 C11orf57Q6ZUT1 292 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 Q6ZVU0 165 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 TFAP2DQ7Z6R9 452 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 ZNF683Q8IZ20 524 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 CHST14Q8NCH0 376 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 BAHD1Q8TBE0 780 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 STK32AQ8WU08 396 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 CPA5Q8WXQ8 436 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 AZIN2Q96A70 460 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 BTN2A3PQ96KV6 586 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 RPRD1AQ96P16 312 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-211ENST00000491581 TUBGCP2Q9BSJ2 902 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 VPS16Q9H269 839 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 NDST4Q9H3R1 872 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 FZD3Q9NPG1 666 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 OR51B4Q9Y5P0 310 aa9.18□□□□□ -0.94
HDAC3-211ENST00000491581 ITIH6Q6UXX5 1313 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 UPK3BL1B0FP48 263 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 UPK3BL2E5RIL1 263 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 NPC1O15118 1278 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 DAB1O75553 588 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 MYF5P13349 255 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 CYP11B1P15538 503 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 CHRNB2P17787 502 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 RRM1P23921 792 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 ADPRHP54922 357 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 ST8SIA6P61647 398 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 SLC6A3Q01959 620 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 SCAPQ12770 1279 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 BNIP3Q12983 259 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 DNAJC3Q13217 504 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 NAA35Q5VZE5 725 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 C19orf48Q6RUI8 117 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 XYLT1Q86Y38 959 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 DNAAF5Q86Y56 855 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 FAM71AQ8IYT1 594 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 ATP6V0D2Q8N8Y2 350 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 OR7D4Q8NG98 312 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 OR14C36Q8NHC7 312 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 SLC30A5Q8TAD4 765 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 GPT2Q8TD30 523 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 CRELD1Q96HD1 420 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 CFAP57Q96MR6 1250 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 NPY6RQ99463 290 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 OMDQ99983 421 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 FEM1AQ9BSK4 669 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
HDAC3-211ENST00000491581 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms