RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HEY1Q9Y5J3 304 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 ILVBLA1L0T0 632 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 I6L893 689 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 APOC4-APOC2K7ER74 178 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 DFFAO00273 331 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 STK10O94804 968 aaKnown RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 PENKP01210 267 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 APOC2P02655 101 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 SRFP11831 508 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 ARSAP15289 507 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 HOXD9P28356 352 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 EIF2DP41214 584 aaKnown RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 DGKGP49619 791 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 GEMIN4P57678 1058 aaKnown RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 ZP2Q05996 745 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 DMC1Q14565 340 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 POLD3Q15054 466 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 PAFAH1B3Q15102 231 aaKnown RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 WHAMMP3Q1A5X7 153 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 SLC9A4Q6AI14 798 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 IL31Q6EBC2 164 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 TIGD7Q6NT04 549 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 RHBDF2Q6PJF5 856 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 CIR1Q86X95 450 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 SUGP1Q8IWZ8 645 aaKnown RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 BBS5Q8N3I7 341 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 SLC44A3Q8N4M1 653 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 ATPAF2Q8N5M1 289 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 RIN3Q8TB24 985 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 WFIKKN2Q8TEU8 576 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 RSAD2Q8WXG1 361 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 C2orf49Q9BVC5 232 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 PLA2G2FQ9BZM2 168 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 MAGEH1Q9H213 219 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 SP110Q9HB58 689 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 PLK2Q9NYY3 685 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 VPS28Q9UK41 221 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 TTC7AQ9ULT0 858 aaPredicted RBP11.24□□□□□ -0.61
VARS2-210ENST00000490699 SLC8A2Q9UPR5 921 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
VARS2-210ENST00000490699 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
VARS2-210ENST00000490699 KRIT1O00522 736 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 DCLK1O15075 740 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 CACNG3O60359 315 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 CNTN5O94779 1100 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 ASGR2P07307 311 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 GLULP15104 373 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 ACTN2P35609 894 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 NNMTP40261 264 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 GNA12Q03113 381 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 LMNB2Q03252 620 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 SULT2A1Q06520 285 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 TAZQ16635 292 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 ALFQ53S48 1182 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 NCBP2-AS2Q69YL0 99 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 RALGPS2Q86X27 583 aaPredicted RBP11.23□□□□□ -0.61
VARS2-210ENST00000490699 CDKL3Q8IVW4 592 aaPredicted RBP11.23□□□□□ -0.61
VARS2-210ENST00000490699 ZNF683Q8IZ20 524 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 AHI1Q8N157 1196 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 UMODL1-AS1Q8N2C9 162 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 RASGEF1CQ8N431 466 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 FIBINQ8TAL6 211 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 UCMAQ8WVF2 138 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 RUNDC3BQ96NL0 473 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 LRRC3BQ96PB8 259 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 ATP13A1Q9HD20 1204 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
VARS2-210ENST00000490699 SLC25A13Q9UJS0 675 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 CDC23Q9UJX2 597 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 FBXL21Q9UKT6 434 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 TBC1D30Q9Y2I9 924 aa11.23□□□□□ -0.61
VARS2-210ENST00000490699 KIF26AQ9ULI4 1882 aaPredicted RBP11.23□□□□□ -0.61
VARS2-210ENST00000490699 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 H7C0C1 242 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 MTSS1O43312 755 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 MFSD11O43934 449 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 APODP05090 189 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 ATP5BP06576 529 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 PABPC1P11940 636 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 POLR2EP19388 210 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 IL4RP24394 825 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 GJA4P35212 333 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 ATP5OP48047 213 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 SGSHP51688 502 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 EIF3EP60228 445 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms