RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ERVW-1Q9UQF0 538 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 GOLGA6L7A0A1B0GV03 622 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 EME2A4GXA9 379 aaPredicted RBP14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 PLD2O14939 933 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 CLIC2O15247 247 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 SLC31A1O15431 190 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 TCEA3O75764 348 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 VNN1O95497 513 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ASLP04424 464 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 LIPCP11150 499 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 HGFP14210 728 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 PRLRP16471 622 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 UGT1A5P35504 534 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 CYP2J2P51589 502 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ZNF445P59923 1031 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 YWHAGP61981 247 aaKnown RBP eCLIP14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 MORC3Q14149 939 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ZCCHC8Q6NZY4 707 aaKnown RBP14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 MMS22LQ6ZRQ5 1243 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 SV2BQ7L1I2 683 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 UNC93AQ86WB7 457 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 MFN1Q8IWA4 741 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 SLC22A18ASQ8N1D0 253 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ZSCAN1Q8NBB4 408 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 TPCN2Q8NHX9 752 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 PTPRN2Q92932 1015 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 NOX5Q96PH1 765 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ADNPQ9H2P0 1102 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 KDM4CQ9H3R0 1056 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 FZD3Q9NPG1 666 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 DNAJC28Q9NX36 388 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 STIM2Q9P246 746 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 STK17AQ9UEE5 414 aa14.18□□□□□ -0.14
EXOSC3-207ENST00000490516 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 MUSKO15146 869 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 STX6O43752 255 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 VAV1P15498 845 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 NCOA4Q13772 614 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 PIK3R6Q5UE93 754 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 B3GNT8Q7Z7M8 397 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 FBXO39Q8N4B4 442 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 ZNF548Q8NEK5 533 aaPredicted RBP14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 PLEKHO2Q8TD55 490 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 NDRG1Q92597 394 aaKnown RBP14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 RPL10LQ96L21 214 aaKnown RBP14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 SYNDIG1Q9H7V2 258 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 EPB41L5Q9HCM4 733 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 SFMBT1Q9UHJ3 866 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 ACSL6Q9UKU0 697 aa14.17□□□□□ -0.14
EXOSC3-207ENST00000490516 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SLC6A4P31645 630 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 NUMBP49757 651 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 CLDN2P57739 230 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 CNTN1Q12860 1018 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 KCNAB2Q13303 367 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SPIDRQ14159 915 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 DEFB133Q30KQ1 61 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 KMT5BQ4FZB7 885 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 AGBL4Q5VU57 503 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 RAB11FIP2Q7L804 512 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 ARHGAP18Q8N392 663 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 KDM1BQ8NB78 822 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 FIBINQ8TAL6 211 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 DUSP16Q9BY84 665 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SEPT10Q9P0V9 454 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 ANAPC2Q9UJX6 822 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SARDHQ9UL12 918 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 CRYBG3Q68DQ2 2970 aa14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 SPENQ96T58 3664 aaKnown RBP14.16□□□□□ -0.14
EXOSC3-207ENST00000490516 CELSR2Q9HCU4 2923 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 SLC7A4O43246 635 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 TGFB1I1O43294 461 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 MSI1O43347 362 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 RNGTTO60942 597 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 SRPRAP08240 638 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 ASPAP45381 313 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 STK19P49842 368 aaPredicted RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 POLE2P56282 527 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 HNRNPKP61978 463 aaKnown RBP eCLIP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 ELAVL3Q14576 367 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 NR0B2Q15466 257 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 FSCBQ5H9T9 825 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 PITRM1Q5JRX3 1037 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 MPP7Q5T2T1 576 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 PPP1R26Q5T8A7 1209 aaPredicted RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 RRAGBQ5VZM2 374 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 ZFAND4Q86XD8 727 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 XXYLT1Q8NBI6 393 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 MYEOVQ96EZ4 313 aa14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 HBS1LQ9Y450 684 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-207ENST00000490516 AGRPO00253 132 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 LATS1O95835 1130 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 C4BPAP04003 597 aaKnown RBP14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 P4HA1P13674 534 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms