RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 FAM221BA6H8Z2 402 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 TCAF2A6NFQ2 919 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 KCNU1A8MYU2 1149 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 HSF2BPO75031 334 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 CBFA2T3O75081 653 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 ADH1BP00325 375 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 IGLV3-25P01717 112 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 PDGFRAP16234 1089 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 SLC9A1P19634 815 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 SLC8A1P32418 973 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 KRT9P35527 623 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 CTSOP43234 321 aaPredicted RBP11.61□□□□□ -0.55
DUBR-204ENST00000490441 PSMD8P48556 350 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 SLC12A1Q13621 1099 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 ELAVL3Q14576 367 aaKnown RBP11.61□□□□□ -0.55
DUBR-204ENST00000490441 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 C9orf64Q5T6V5 341 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 NCEH1Q6PIU2 408 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 LAYNQ6UX15 382 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 DEFB106AQ8N104 65 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
DUBR-204ENST00000490441 OR2T34Q8NGX1 318 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 SHC3Q92529 594 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 IGSF8Q969P0 613 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 ACE2Q9BYF1 805 aaPredicted RBP11.61□□□□□ -0.55
DUBR-204ENST00000490441 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 SLCO1B1Q9Y6L6 691 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 KNTC1P50748 2209 aa11.61□□□□□ -0.55
DUBR-204ENST00000490441 ITIH6Q6UXX5 1313 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 APC2O95996 2303 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 SRRM3A6NNA2 597 aaPredicted RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 BECN2A8MW95 431 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 DFNA5O60443 496 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 GRAP2O75791 330 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 IL1BP01584 269 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 IGHV4-34P06331 123 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 C5AR1P21730 350 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 FECHP22830 423 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 GRK6P43250 576 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 GALCP54803 685 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 RACK1P63244 317 aaKnown RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 PITX1P78337 314 aaPredicted RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 NME3Q13232 169 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 TAF5Q15542 800 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 OR6B2Q6IFH4 312 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 C11orf57Q6ZUT1 292 aaPredicted RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
DUBR-204ENST00000490441 DSG4Q86SJ6 1040 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 CIR1Q86X95 450 aaPredicted RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 APCDD1Q8J025 514 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 STK40Q8N2I9 435 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 MLKLQ8NB16 471 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 RPL10LQ96L21 214 aaKnown RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 SLC6A18Q96N87 628 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 SLC2A13Q96QE2 648 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 CPXM1Q96SM3 734 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 AASDHPPTQ9NRN7 309 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 SLCO3A1Q9UIG8 710 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 SLC25A13Q9UJS0 675 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
DUBR-204ENST00000490441 PCDHGC3Q9UN70 934 aa11.6□□□□□ -0.55
DUBR-204ENST00000490441 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 H0Y8X5 98 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 VILLO15195 856 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 PCDHGA12O60330 932 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 GOT1P17174 413 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 PON1P27169 355 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 MZF1P28698 734 aaPredicted RBP11.59□□□□□ -0.55
DUBR-204ENST00000490441 CTSKP43235 329 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 NUMBP49757 651 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 STK19P49842 368 aaPredicted RBP11.59□□□□□ -0.55
DUBR-204ENST00000490441 APBA1Q02410 837 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 ACCSLQ4AC99 568 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 SLC45A4Q5BKX6 768 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 FBXL22Q6P050 247 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 DBX2Q6ZNG2 339 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 SLCO6A1Q86UG4 719 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 OR14C36Q8NHC7 312 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 BAHD1Q8TBE0 780 aaPredicted RBP11.59□□□□□ -0.55
DUBR-204ENST00000490441 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 PRMT1Q99873 361 aaKnown RBP11.59□□□□□ -0.55
DUBR-204ENST00000490441 ADAMTS1Q9UHI8 967 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
DUBR-204ENST00000490441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.58□□□□□ -0.56
DUBR-204ENST00000490441 PES1O00541 588 aaKnown RBP11.58□□□□□ -0.56
DUBR-204ENST00000490441 KCNK3O14649 394 aa11.58□□□□□ -0.56
DUBR-204ENST00000490441 TNFSF14O43557 240 aa11.58□□□□□ -0.56
DUBR-204ENST00000490441 DAB1O75553 588 aa11.58□□□□□ -0.56
DUBR-204ENST00000490441 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
DUBR-204ENST00000490441 CCR5P51681 352 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms