RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
BRD9-208ENST00000489816 NVLO15381 856 aaKnown RBP16.08■□□□□ 0.16
BRD9-208ENST00000489816 PGK1P00558 417 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 LTFP02788 710 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 PRKCGP05129 697 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
BRD9-208ENST00000489816 ANO7Q6IWH7 933 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 NAPRTQ6XQN6 538 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 RIPOR1Q6ZS17 1223 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 PHTF2Q8N3S3 785 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 FBXO41Q8TF61 875 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 DDX50Q9BQ39 737 aaKnown RBP16.08■□□□□ 0.16
BRD9-208ENST00000489816 GORASP1Q9BQQ3 440 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 SLC7A8Q9UHI5 535 aa16.08■□□□□ 0.16
BRD9-208ENST00000489816 KLF11O14901 512 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 DCXO43602 365 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 SNNO75324 88 aaPredicted RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 WFS1O76024 890 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 B3GAT3O94766 335 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 RALBP11234 206 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 NMBRP28336 390 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 PGFP49763 221 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 POU6F1Q14863 301 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 ISLR2Q6UXK2 745 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 SCUBE1Q8IWY4 988 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 ZNF781Q8N8C0 355 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 PYDC1Q8WXC3 89 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 SGF29Q96ES7 293 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 WDR6Q9NNW5 1121 aaKnown RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 APOBEC2Q9Y235 224 aaKnown RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 LRIG2O94898 1065 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 CELF2O95319 508 aaKnown RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 PROCP04070 461 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 FAM35AQ86V20 835 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 TRIM42Q8IWZ5 723 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 ULK2Q8IYT8 1036 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 PPP4R1Q8TF05 950 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 PANX3Q96QZ0 392 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 FERMT1Q9BQL6 677 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 WDR55Q9H6Y2 383 aaPredicted RBP16.07■□□□□ 0.16
BRD9-208ENST00000489816 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 ST3GAL5Q9UNP4 418 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 FIS1Q9Y3D6 152 aa16.07■□□□□ 0.16
BRD9-208ENST00000489816 A0A096LPK6 155 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 DCLK1O15075 740 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 XPOTO43592 962 aaKnown RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 DAB1O75553 588 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 CHRNGP07510 517 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 CPA3P15088 417 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 YIPF3Q9GZM5 350 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 COPG2Q9UBF2 871 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 TAGLN3Q9UI15 199 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 MBLAC1A4D2B0 266 aaPredicted RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 TK2O00142 265 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 GLRA3O75311 464 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 PNPLA4P41247 253 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 DAOAP59103 153 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 CTBP1Q13363 440 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 DPYSQ14117 519 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 TCHHL1Q5QJ38 904 aaPredicted RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 SDHAF4Q5VUM1 108 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 ZNF280DQ6N043 979 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 KBTBD2Q8IY47 623 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.06■□□□□ 0.16
BRD9-208ENST00000489816 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 MARK4Q96L34 752 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 MLPHQ9BV36 600 aaPredicted RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 GP5P40197 560 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 ITGA7Q13683 1181 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 KRT72Q14CN4 511 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 NOMO2Q5JPE7 1267 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 SPDYAQ5MJ70 313 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 LRRC74BQ6ZQY2 392 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 MARK2Q7KZI7 788 aaKnown RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 PSTKQ8IV42 348 aaKnown RBP16.06■□□□□ 0.16
BRD9-208ENST00000489816 IPMKQ8NFU5 416 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 SORT1Q99523 831 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 OMDQ99983 421 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 CCDC106Q9BWC9 280 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 CDY2AQ9Y6F7 541 aa16.06■□□□□ 0.16
BRD9-208ENST00000489816 SIN3BO75182 1162 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 KCNE1P15382 129 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 ANKRD20A4Q4UJ75 823 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■□□□□ 9.9
BRD9-208ENST00000489816 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
BRD9-208ENST00000489816 MAPK15Q8TD08 544 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 PPM1HQ9ULR3 514 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms