RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	NNMT	P40261	264 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	CTSO	P43234	321 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	IRAK1	P51617	712 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ZNF143	P52747	638 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	COPA	P53621	1224 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	HDAC4	P56524	1084 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ARHGAP8	P85298	464 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ZBED6	P86452	979 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	MAMLD1	Q13495	774 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ARID5B	Q14865	1188 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ALF	Q53S48	1182 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	C6orf118	Q5T5N4	469 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	SH3PXD2A	Q5TCZ1	1133 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	SETD3	Q86TU7	594 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	VPS36	Q86VN1	386 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	TMEFF1	Q8IYR6	380 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ZNF683	Q8IZ20	524 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ZNF366	Q8N895	744 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	MRGPRX3	Q96LB0	322 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	FEM1A	Q9BSK4	669 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	XPO4	Q9C0E2	1151 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	MUC3B	Q9H195	1237 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	PRSS16	Q9NQE7	514 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	ITM2C	Q9NQX7	267 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	TMPRSS4	Q9NRS4	437 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	VPS45	Q9NRW7	570 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	VPS28	Q9UK41	221 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	TBC1D30	Q9Y2I9	924 aa		11.41	□□□□□ -0.58
GGA1-222	ENST00000489772	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	6e-7	■■■□□ 17.9
GGA1-222	ENST00000489772	ITIH6	Q6UXX5	1313 aa		11.4	□□□□□ -0.58
GGA1-222	ENST00000489772	IGLV3-10	A0A075B6K4	115 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	BCLAF3	A2AJT9	711 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	TARSL2	A2RTX5	802 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	DDX3X	O00571	662 aa	Known RBP eCLIP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	RNASEH1	O60930	286 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	NDUFS2	O75306	463 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CNTN5	O94779	1100 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	SERPING1	P05155	500 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	RHOC	P08134	193 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	ZNF806	P0C7X5	589 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	SDHB	P21912	280 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CD6	P30203	668 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	OR1E1	P30953	314 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	DPP6	P42658	865 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	PTGER3	P43115	390 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	TPMT	P51580	245 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	RPL7A	P62424	266 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	ZBTB16	Q05516	673 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CCDC6	Q16204	474 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	TDRD12	Q587J7	1177 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	PLA2G2C	Q5R387	149 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	PPP1R15B	Q5SWA1	713 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	LYSMD4	Q5XG99	296 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	PRR23C	Q6ZRP0	262 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	ARMCX6	Q7L4S7	300 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CYP2U1	Q7Z449	544 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CACUL1	Q86Y37	369 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	C12orf50	Q8NA57	414 aa	Predicted RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	RNF214	Q8ND24	703 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	TRIM11	Q96F44	468 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	MYO19	Q96H55	970 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	CNPY3	Q9BT09	278 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	ZYG11B	Q9C0D3	744 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	OSBPL2	Q9H1P3	480 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	MPP6	Q9NZW5	540 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	USP36	Q9P275	1121 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	OR12D3	Q9UGF7	316 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	SLCO3A1	Q9UIG8	710 aa		11.4	□□□□□ -0.59
GGA1-222	ENST00000489772	EDDM13	A0A1B0GTR0	161 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	TTC34	A8MYJ7	566 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	CCP110	O43303	1012 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	SIN3B	O75182	1162 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	RTN2	O75298	545 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	DNTT	P04053	509 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	GYPC	P04921	128 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	MYBL1	P10243	752 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	CASP14	P31944	242 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	NUMB	P49757	651 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	KRT83	P78385	493 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	NRG1	Q02297	640 aa	Predicted RBP	11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	RAB6C	Q53S08	254 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	C9orf64	Q5T6V5	341 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	ZNF776	Q68DI1	518 aa	Predicted RBP	11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	SPECC1L	Q69YQ0	1117 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	PLEKHA7	Q6IQ23	1121 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	RWDD4	Q6NW29	188 aa	Known RBP	11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	SCYL2	Q6P3W7	929 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	TFAP2D	Q7Z6R9	452 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	SLFN11	Q7Z7L1	901 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	DEFB119	Q8N690	84 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	CCDC185	Q8N715	623 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	PIGK	Q92643	395 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	FOXJ1	Q92949	421 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	NTAN1	Q96AB6	310 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	ALG14	Q96F25	216 aa		11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	TOE1	Q96GM8	510 aa	Known RBP	11.39	□□□□□ -0.59
GGA1-222	ENST00000489772	RPL10L	Q96L21	214 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms