RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 SKA1Q96BD8 255 aa20.72■□□□□ 0.91
CACFD1-205ENST00000489519 ORAI3Q9BRQ5 295 aa20.72■□□□□ 0.91
CACFD1-205ENST00000489519 SYNCQ9H7C4 482 aa20.72■□□□□ 0.91
CACFD1-205ENST00000489519 SIX2Q9NPC8 291 aa20.72■□□□□ 0.91
CACFD1-205ENST00000489519 TPX2Q9ULW0 747 aaKnown RBP20.72■□□□□ 0.91
CACFD1-205ENST00000489519 SYNJ2BP-COX16A0A087WUM0 186 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 A0A1W2PPC4 97 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 FOXN3O00409 490 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 VILLO15195 856 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 GRAP2O75791 330 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 PDGFRAP16234 1089 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 GOT1P17174 413 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 NOS2P35228 1153 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 VASPP50552 380 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 SLC6A3Q01959 620 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 OLFML1Q6UWY5 402 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 FAM183BPQ6ZVS7 135 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 SND1Q7KZF4 910 aaKnown RBP eCLIP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 SLC26A9Q7LBE3 791 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 ZDHHC17Q8IUH5 632 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 STK40Q8N2I9 435 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 PNPLA1Q8N8W4 532 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 BAHD1Q8TBE0 780 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 PTPRN2Q92932 1015 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 RPRD1AQ96P16 312 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 ACE2Q9BYF1 805 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-205ENST00000489519 RRN3Q9NYV6 651 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 COX16Q9P0S2 106 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 SERGEFQ9UGK8 458 aa20.71■□□□□ 0.91
CACFD1-205ENST00000489519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 PCDHGA12O60330 932 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 MZF1P28698 734 aaPredicted RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CLCN1P35523 988 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CTSKP43235 329 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 PSMD8P48556 350 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CCT8P50990 548 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CCR5P51681 352 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 C21orf59P57076 290 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 NME3Q13232 169 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 ZNF177Q13360 481 aaPredicted RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 AUHQ13825 339 aaKnown RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CXorf57Q6NSI4 855 aaKnown RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 SLCO6A1Q86UG4 719 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 SLC47A2Q86VL8 602 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 FAM71AQ8IYT1 594 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 C1orf131Q8NDD1 294 aaKnown RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 ZNF397Q8NF99 534 aaPredicted RBP20.7■□□□□ 0.9
CACFD1-205ENST00000489519 NDST4Q9H3R1 872 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 TMEM51Q9NW97 253 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 CHMP5Q9NZZ3 219 aa20.7■□□□□ 0.9
CACFD1-205ENST00000489519 TMEM131Q92545 1883 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 SPEGQ15772 3267 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 SRRM3A6NNA2 597 aaPredicted RBP20.69■□□□□ 0.9
CACFD1-205ENST00000489519 DAB1O75553 588 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 IL1BP01584 269 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 ERBB2P04626 1255 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 ERCC5P28715 1186 aaPredicted RBP20.69■□□□□ 0.9
CACFD1-205ENST00000489519 GRK6P43250 576 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 STK19P49842 368 aaPredicted RBP20.69■□□□□ 0.9
CACFD1-205ENST00000489519 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 DSG4Q86SJ6 1040 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 CIR1Q86X95 450 aaPredicted RBP20.69■□□□□ 0.9
CACFD1-205ENST00000489519 AADATQ8N5Z0 425 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 SPAG5Q96R06 1193 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 TUBGCP2Q9BSJ2 902 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 FEM1AQ9BSK4 669 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 CLSTN2Q9H4D0 955 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 DACH1Q9UI36 760 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 AJAP1Q9UKB5 411 aaPredicted RBP20.69■□□□□ 0.9
CACFD1-205ENST00000489519 VANGL2Q9ULK5 521 aa20.69■□□□□ 0.9
CACFD1-205ENST00000489519 H0Y8X5 98 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 M0QYT0 321 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 KCNK3O14649 394 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 CLDN11O75508 207 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 KCNJ12Q14500 433 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 INAVAQ3KP66 663 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 PTPN20Q4JDL3 420 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 KCNT1Q5JUK3 1230 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 LAYNQ6UX15 382 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 CCNI2Q6ZMN8 369 aaPredicted RBP20.68■□□□□ 0.9
CACFD1-205ENST00000489519 TMEM35BQ8NCS4 154 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 OR14C36Q8NHC7 312 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 ALG14Q96F25 216 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 PDCL3Q9H2J4 239 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 KDM4CQ9H3R0 1056 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 SLC25A13Q9UJS0 675 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 PAXBP1Q9Y5B6 917 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 HS3ST4Q9Y661 456 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 FAM208BQ5VWN6 2430 aa20.68■□□□□ 0.9
CACFD1-205ENST00000489519 ZFHX4Q86UP3 3567 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 C10orf142B7Z368 130 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 ATP9BO43861 1147 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 PAGE1O75459 146 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 ADPRHP54922 357 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 CENPCQ03188 943 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 C5orf22Q49AR2 442 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 ACCSLQ4AC99 568 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 BRMS1LQ5PSV4 323 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 FAM46CQ5VWP2 391 aa20.67■□□□□ 0.9
CACFD1-205ENST00000489519 FRS2Q8WU20 508 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms