RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SLC8A1P32418 973 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 CD70P32970 193 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 AFMP43652 599 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 PSMD8P48556 350 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 INHBCP55103 352 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 CYP4F2P78329 520 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
SSBP1-212ENST00000489378 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 POM121L1PQ3SYA9 428 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 MPPE1Q53F39 396 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 C9orf64Q5T6V5 341 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 AHI1Q8N157 1196 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 ARL14Q8N4G2 192 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 ZNF276Q8N554 614 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 FAM184AQ8NB25 1140 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 ARRDC3Q96B67 414 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 CCDC127Q96BQ5 260 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 DNAJC19Q96DA6 116 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 LLPHQ9BRT6 129 aaKnown RBP9.55□□□□□ -0.88
SSBP1-212ENST00000489378 LRRC4CQ9HCJ2 640 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 KIF3AQ9Y496 699 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 SLC12A8A0AV02 714 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 RNASEH1O60930 286 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 PIAS2O75928 621 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 ATP5BP06576 529 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 FAM200BP0CF97 657 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 GAP43P17677 238 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 POLR2EP19388 210 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 SGSHP51688 502 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 NEK4P51957 841 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 KIF11P52732 1056 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 ANAPC15P60006 121 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 OVGP1Q12889 678 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TRPC3Q13507 836 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 QPCTQ16769 361 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 HNRNPA1L2Q32P51 320 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 CRTC1Q6UUV9 634 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.881e-16■■□□□ 13.8
SSBP1-212ENST00000489378 CCDC186Q7Z3E2 898 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 PRPF39Q86UA1 669 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 TBC1D3Q8IZP1 549 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 WDR36Q8NI36 951 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 MRGPRX3Q96LB0 322 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 FAM129BQ96TA1 746 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 CGRRF1Q99675 332 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 GEMIN8Q9NWZ8 242 aaKnown RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 CLIC5Q9NZA1 410 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 MARCH2Q9P0N8 246 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 PLEKHB1Q9UF11 243 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-212ENST00000489378 CYTH4Q9UIA0 394 aa9.54□□□□□ -0.88
SSBP1-212ENST00000489378 NYNRINQ9P2P1 1898 aaKnown RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 CPED1A4D0V7 1026 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 K7ESM1 405 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 KIAA0391O15091 583 aaKnown RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 MAGEC1O60732 1142 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 NEBLO76041 1014 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 ITGA2BP08514 1039 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 WT1P19544 449 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 SLC5A2P31639 672 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 ATICP31939 592 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 METAP1P53582 386 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 STAT4Q14765 748 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 CDKN3Q16667 212 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 BMT2Q1RMZ1 405 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 GUSBP11Q6P575 273 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 RBM44Q6ZP01 1051 aaKnown RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 CRYBG2Q8N1P7 616 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 SYAP1Q96A49 352 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 TMA16Q96EY4 203 aaKnown RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 KLHDC7BQ96G42 594 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 LIN37Q96GY3 246 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 FUCA2Q9BTY2 467 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 KLHL11Q9NVR0 708 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 NLGN3Q9NZ94 848 aa9.53□□□□□ -0.88
SSBP1-212ENST00000489378 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
SSBP1-212ENST00000489378 TTC34A8MYJ7 566 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 RTN2O75298 545 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 ALPPL2P10696 532 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 C5AR1P21730 350 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 HOXD13P35453 343 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms