RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 KLHL14Q9P2G3 628 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 IGSF9Q9P2J2 1179 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TBK1Q9UHD2 729 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TRHDEQ9UKU6 1024 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 INSL6Q9Y581 213 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PRRC2BQ5JSZ5 2229 aaKnown RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PATJQ8NI35 1801 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TDRD15B5MCY1 1934 aaKnown RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TCP11X1B4DZS4 312 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 M0QYT0 321 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CAPN9O14815 690 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 KLF11O14901 512 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 PSMD3O43242 534 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ATP5HO75947 161 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 APOEP02649 317 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 LTFP02788 710 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ADH1AP07327 375 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 APRTP07741 180 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 MYOGP15173 224 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 KRT4P19013 534 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ALDH3A1P30838 453 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 SSTR1P30872 391 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ELK3P41970 407 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 IFNAR2P48551 515 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 RABGGTBP53611 331 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 SLC18A2Q05940 514 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 SEPT7Q16181 437 aaKnown RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CA9Q16790 459 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 MDH1BQ5I0G3 518 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 BRMS1LQ5PSV4 323 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 STXBP5Q5T5C0 1151 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 RNF187Q5TA31 235 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 STEAP4Q687X5 459 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC8BQ6P9F7 803 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 DCLRE1AQ6PJP8 1040 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 NPNTQ6UXI9 565 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 AGMOQ6ZNB7 445 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 C4orf50Q6ZRC1 276 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 RFX8Q6ZV50 586 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CYP2U1Q7Z449 544 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ECHDC2Q86YB7 292 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC49Q8IUZ0 686 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 MICALL1Q8N3F8 863 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 TMEM130Q8N3G9 435 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 BANPQ8N9N5 519 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ACMSDQ8TDX5 336 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CLEC4CQ8WTT0 213 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 MZB1Q8WU39 189 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 PCED1BQ96HM7 432 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 APOPT1Q96IL0 206 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 SUSD3Q96L08 255 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 GAD1Q99259 594 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 WDR83Q9BRX9 315 aaKnown RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 GOLGA2P5Q9HBQ8 144 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ETNK1Q9HBU6 452 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 DMAP1Q9NPF5 467 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 CRTAC1Q9NQ79 661 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 TMEM161AQ9NX61 479 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 DONSONQ9NYP3 566 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 KANSL3Q9P2N6 904 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ZC3H7BQ9UGR2 993 aaKnown RBP8.69□□□□□ -1.02
VTI1A-207ENST00000489357 FBXW11Q9UKB1 542 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 SLC12A4Q9UP95 1085 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 BRWD1Q9NSI6 2320 aa8.69□□□□□ -1.02
VTI1A-207ENST00000489357 TCRBV7S3A2A0A539 114 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 LCHNA4D1U4 455 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 LINC01553A4QN01 128 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 FAM159BA6NKW6 160 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 HHLA1C9JL84 531 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 H0YHG0 523 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 GOLGA8MH3BSY2 632 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 PIK3R2O00459 728 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 DCLK1O15075 740 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 HNRNPCL1O60812 293 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 DCTN3O75935 186 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ALDH1A2O94788 518 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 UPP2O95045 317 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 TGDSO95455 350 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 MT-ND3P03897 115 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ATP5BP06576 529 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 GOT1P17174 413 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 POU3F3P20264 500 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 TAC1P20366 129 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CXCR3P49682 368 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CLCNKBP51801 687 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ERVK-21P61565 698 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 YWHAGP61981 247 aaKnown RBP eCLIP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 COG7P83436 770 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 GBE1Q04446 702 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CDK18Q07002 472 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 MPP2Q14168 576 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 KCTD19Q17RG1 926 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 TTC31Q49AM3 519 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms