RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 MS4A13Q5J8X5 152 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 TBC1D3GQ6DHY5 549 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 TBC1D3CQ6IPX1 549 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 SPATS2Q86XZ4 545 aaKnown RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 TBC1D3Q8IZP1 549 aaPredicted RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 APCDD1Q8J025 514 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 KDM1BQ8NB78 822 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 DQX1Q8TE96 717 aaKnown RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 IRGQQ8WZA9 623 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 AZIN2Q96A70 460 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 FCRL2Q96LA5 508 aaPredicted RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 MIS12Q9H081 205 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 XPO7Q9UIA9 1087 aaKnown RBP11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 COQ4Q9Y3A0 265 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 COL6A6A6NMZ7 2263 aa11.17□□□□□ -0.62
PTP4A2-206ENST00000489313 M0QYV0 167 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SDC3O75056 442 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 LUC7L3O95232 432 aaKnown RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ADH1BP00325 375 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 FYNP06241 537 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SRPRAP08240 638 aaKnown RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 PLA2G2AP14555 144 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CKMT2P17540 419 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 C5AR1P21730 350 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 GLDCP23378 1020 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 DRD3P35462 400 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RXRGP48443 463 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RNF219Q5W0B1 726 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 NAPEPLDQ6IQ20 393 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 KANSL1Q7Z3B3 1105 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CCDC117Q8IWD4 279 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 FGF11Q92914 225 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SPATA32Q96LK8 384 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 DDX50Q9BQ39 737 aaKnown RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ERVMER34-1Q9H9K5 563 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 KIAA1257Q9ULG3 409 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CLCA2Q9UQC9 943 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RNF225M0QZC1 329 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 LATO43561 262 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RTN2O75298 545 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 MOCS3O95396 460 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CXADRP78310 365 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 INSM1Q01101 510 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 TLE3Q04726 772 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ILKQ13418 452 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 RAP1GAP2Q684P5 730 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 PCSK4Q6UW60 755 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 KRBA2Q6ZNG9 492 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 GPR155Q7Z3F1 870 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ZNF605Q86T29 641 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 TAC4Q86UU9 113 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 LGI2Q8N0V4 545 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 OXR1Q8N573 874 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SLC39A13Q96H72 371 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 SERPINB11Q96P15 392 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 ARHGAP20Q9P2F6 1191 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CYTH4Q9UIA0 394 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 TLR6Q9Y2C9 796 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 CA5BQ9Y2D0 317 aa11.16□□□□□ -0.62
PTP4A2-206ENST00000489313 FLNCQ14315 2725 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 PAEPP09466 180 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 TBXAS1P24557 533 aaPredicted RBP11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 ACTN2P35609 894 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 ELAVL3Q14576 367 aaKnown RBP11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 PROX2Q3B8N5 592 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 KDM7AQ6ZMT4 941 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 PRPF39Q86UA1 669 aaKnown RBP11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 ERICH1Q86X53 443 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 CIR1Q86X95 450 aaPredicted RBP11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 SPACA3Q8IXA5 215 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 DCBLD1Q8N8Z6 715 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 MFSD2AQ8NA29 543 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 RFFLQ8WZ73 363 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 KAT5Q92993 513 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 SNX21Q969T3 373 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 FAM149B1Q96BN6 582 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 SARDHQ9UL12 918 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 PCDHB4Q9Y5E5 795 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 PCDHB1Q9Y5F3 818 aa11.15□□□□□ -0.62
PTP4A2-206ENST00000489313 TEX51A0A1B0GUA7 166 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms