RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 POM121L1PQ3SYA9 428 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 HS1BP3Q53T59 392 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 MSANTD2Q6P1R3 559 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 INTS8Q75QN2 995 aaKnown RBP16.74■□□□□ 0.27
USP48-210ENST00000489108 APCDD1Q8J025 514 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 AZIN2Q96A70 460 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 KLHDC7BQ96G42 594 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 DMTF1Q9Y222 760 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 SSUH2Q9Y2M2 353 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 CEP83Q9Y592 693 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 CALUO43852 315 aaPredicted RBP16.73■□□□□ 0.27
USP48-210ENST00000489108 GIMD1P0DJR0 217 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 CKMT1AP12532 417 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 KRT13P13646 458 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 NUMBP49757 651 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 STK19P49842 368 aaPredicted RBP16.73■□□□□ 0.27
USP48-210ENST00000489108 DAOAP59103 153 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 BST2Q10589 180 aaKnown RBP16.73■□□□□ 0.27
USP48-210ENST00000489108 CCDC117Q8IWD4 279 aaPredicted RBP16.73■□□□□ 0.27
USP48-210ENST00000489108 FAXDC2Q96IV6 333 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 KDM4CQ9H3R0 1056 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 CNGB3Q9NQW8 809 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 THSD1Q9NS62 852 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 SERTAD1Q9UHV2 236 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
USP48-210ENST00000489108 TYW5A2RUC4 315 aaKnown RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 PRAMEF26H0Y7S4 382 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 K7ENP7 123 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 PIK3R2O00459 728 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 PLRG1O43660 514 aaKnown RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 GABBR2O75899 941 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 LUC7L3O95232 432 aaKnown RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 MOCS3O95396 460 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 YEATS4O95619 227 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 NUDT1P36639 197 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 CSRP3P50461 194 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 SGO2Q562F6 1265 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 DCAF6Q58WW2 860 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 RNF219Q5W0B1 726 aaPredicted RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 KRT39Q6A163 491 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 PRICKLE2Q7Z3G6 844 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 FAM186BQ8IYM0 893 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 KCTD13Q8WZ19 329 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 APOLD1Q96LR9 279 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 ABCG4Q9H172 646 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 NUCKS1Q9H1E3 243 aaKnown RBP16.72■□□□□ 0.27
USP48-210ENST00000489108 KLHL11Q9NVR0 708 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
USP48-210ENST00000489108 A0A1W2PNU3 283 aaPredicted RBP16.71■□□□□ 0.27
USP48-210ENST00000489108 THEGLP0DJG4 465 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 NR2F2P24468 414 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 SRSF1Q07955 248 aaKnown RBP eCLIP16.71■□□□□ 0.272e-9■■■□□ 16.4
USP48-210ENST00000489108 KCNMA1Q12791 1236 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 ELAVL3Q14576 367 aaKnown RBP16.71■□□□□ 0.27
USP48-210ENST00000489108 TRIM69Q86WT6 500 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 LURAP1LQ8IV03 231 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 CEP57L1Q8IYX8 460 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 SCML4Q8N228 414 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 FCRL2Q96LA5 508 aaPredicted RBP16.71■□□□□ 0.27
USP48-210ENST00000489108 MYOCQ99972 504 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 IL17BQ9UHF5 180 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 SATB2Q9UPW6 733 aa16.71■□□□□ 0.27
USP48-210ENST00000489108 LY6G6EA0A0G2JKS1 128 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 SLC7A4O43246 635 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 CD19P15391 556 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 RBMS1P29558 406 aaKnown RBP16.7■□□□□ 0.26
USP48-210ENST00000489108 GTF2H1P32780 548 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
USP48-210ENST00000489108 NNMTP40261 264 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 RGS7P49802 495 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 ISXQ2M1V0 245 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 SETMARQ53H47 684 aaPredicted RBP16.7■□□□□ 0.26
USP48-210ENST00000489108 C3orf38Q5JPI3 329 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 KLK6Q92876 244 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 SLC46A1Q96NT5 459 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 SPAG5Q96R06 1193 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 TRIM4Q9C037 500 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 U3KQA8 63 aa16.7■□□□□ 0.26
USP48-210ENST00000489108 SLC31A1O15431 190 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 PIAS2O75928 621 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 LTFP02788 710 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 GP1BAP07359 652 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms