RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SPHK2Q9NRA0 654 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 DUS2Q9NX74 493 aaKnown RBP16.44■□□□□ 0.22
CLDN11-208ENST00000488989 MYO10Q9HD67 2058 aa16.44■□□□□ 0.22
CLDN11-208ENST00000488989 COL4A3Q01955 1670 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 MYO18AQ92614 2054 aaKnown RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 ILVBLA1L0T0 632 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF189O75820 626 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 OR1E1P30953 314 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 TUBB4BP68371 445 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF177Q13360 481 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 HTR4Q13639 388 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 PRKD1Q15139 912 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 SMAD2Q15796 467 aaKnown RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 PARP15Q460N3 678 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 SLC45A4Q5BKX6 768 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 C6orf118Q5T5N4 469 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 CXorf57Q6NSI4 855 aaKnown RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 TMEM25Q86YD3 366 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 ATL2Q8NHH9 583 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 DDI1Q8WTU0 396 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 TSGA13Q96PP4 275 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 QKIQ96PU8 341 aaKnown RBP eCLIP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 KRT12Q99456 494 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 FAM118BQ9BPY3 351 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 MAGEH1Q9H213 219 aa16.43■□□□□ 0.22
CLDN11-208ENST00000488989 FEZ2Q9UHY8 353 aaPredicted RBP16.43■□□□□ 0.22
CLDN11-208ENST00000488989 KIAA1549LQ6ZVL6 1849 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 CFAP69A5D8W1 941 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 EFCAB8A8MWE9 144 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 HOXC11O43248 304 aaPredicted RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 RAMP2O60895 175 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 MAP3K6O95382 1288 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 NFATC1O95644 943 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 CYP17A1P05093 508 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 PSMC3P17980 439 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 GARSP41250 739 aaKnown RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 PTGIRP43119 386 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 KCNJ1P48048 391 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 LMNB2Q03252 620 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 PPIDQ08752 370 aaKnown RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 DHX34Q14147 1143 aaKnown RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 DHCR24Q15392 516 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 LY6G5CQ5SRR4 150 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 TPGS1Q6ZTW0 290 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 CDKL3Q8IVW4 592 aaPredicted RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 KLHL7Q8IXQ5 586 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 PLCD3Q8N3E9 789 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF557Q8N988 423 aaPredicted RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 OR52K2Q8NGK3 314 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 FIBINQ8TAL6 211 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 ATP2A3Q93084 1043 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 FATE1Q969F0 183 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 CELF6Q96J87 481 aaKnown RBP16.42■□□□□ 0.22
CLDN11-208ENST00000488989 LMLNQ96KR4 655 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 USP29Q9HBJ7 922 aa16.42■□□□□ 0.22
CLDN11-208ENST00000488989 ARHGAP42A6NI28 874 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 RASA4BC9J798 803 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 H7C0C1 242 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 CHADO15335 359 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 RASA4O43374 803 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 RHOCP08134 193 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 STIP1P31948 543 aaKnown RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 ATP5OP48047 213 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 OXCT1P55809 520 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 GNA12Q03113 381 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 SNX1Q13596 522 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 POLD3Q15054 466 aaPredicted RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 ZC3H18Q86VM9 953 aaKnown RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 ALLCQ8N6M5 410 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 NETO2Q8NC67 525 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 CCDC26Q8TAB7 109 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 GRK7Q8WTQ7 553 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 TFB1MQ8WVM0 346 aaKnown RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 NXPE3Q969Y0 559 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 KXD1Q9BQD3 176 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 BBS2Q9BXC9 721 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 ACE2Q9BYF1 805 aaPredicted RBP16.41■□□□□ 0.22
CLDN11-208ENST00000488989 SLC2A11Q9BYW1 496 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 HPS4Q9NQG7 708 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 AMACRQ9UHK6 382 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 FBXO10Q9UK96 956 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 OR51B4Q9Y5P0 310 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 COL4A2P08572 1712 aa16.41■□□□□ 0.22
CLDN11-208ENST00000488989 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 H0Y626 953 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms