RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SHBQ15464 509 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 COL28A1Q2UY09 1125 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 RNF219Q5W0B1 726 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 TMPRSS7Q7RTY8 843 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 C14orf80Q86SX3 495 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 FBRSQ9HAH7 460 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 POPDC2Q9HBU9 364 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 SARDHQ9UL12 918 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 CA5BQ9Y2D0 317 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 PCDHGB2Q9Y5G2 931 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 KNTC1P50748 2209 aa16.41■□□□□ 0.22
ERGIC3-217ENST00000488935 NBEAQ8NFP9 2946 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 EDDM13A0A1B0GTR0 161 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 TRABD2BA6NFA1 517 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 KCNU1A8MYU2 1149 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 F5H5T6 163 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 RTN2O75298 545 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 MOCS3O95396 460 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 IGLV3-25P01717 112 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 C7P10643 843 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 BNIP3Q12983 259 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 NME3Q13232 169 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 BECN1Q14457 450 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 OR6B2Q6IFH4 312 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 FAM183BPQ6ZVS7 135 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 USP30Q70CQ3 517 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 BTN2A3PQ96KV6 586 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 CDC6Q99741 560 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 ACE2Q9BYF1 805 aaPredicted RBP16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 OSGEPQ9NPF4 335 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 DDIT4Q9NX09 232 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 GPSM3Q9Y4H4 160 aa16.4■□□□□ 0.22
ERGIC3-217ENST00000488935 ATRXP46100 2492 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3DA0A087WVF3 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3IA0A087WXS9 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3EA0A087X179 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3KA0A087X1G2 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 A0A1B0GTQ1 180 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TARSL2A2RTX5 802 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3FA6NER0 549 aaPredicted RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3LB9A6J9 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 MED7O43513 233 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 ERBB2P04626 1255 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3HP0C7X1 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TFE3P19532 575 aaPredicted RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 DRD3P35462 400 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 ADPRHP54922 357 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 MARSP56192 900 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 RACK1P63244 317 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 NNTQ13423 1086 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 ACCSLQ4AC99 568 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 HSP90AA4PQ58FG1 418 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3GQ6DHY5 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3CQ6IPX1 549 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 CXorf57Q6NSI4 855 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TRIM65Q6PJ69 517 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TBC1D3Q8IZP1 549 aaPredicted RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 EID2Q8N6I1 236 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 ATP6V0D2Q8N8Y2 350 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 C1orf131Q8NDD1 294 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 OR2T34Q8NGX1 318 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 KLK6Q92876 244 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 SERAC1Q96JX3 654 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 SIK2Q9H0K1 926 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 VANGL2Q9ULK5 521 aa16.39■□□□□ 0.21
ERGIC3-217ENST00000488935 ARID1BQ8NFD5 2236 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 ASXL3Q9C0F0 2248 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 A0A1W2PR77 199 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 LRRC72A6NJI9 287 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 RNF103O00237 685 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 VILLO15195 856 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 SART1O43290 800 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 TNFSF14O43557 240 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 DKK1O94907 266 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 GNA14O95837 355 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 GOT1P17174 413 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 PPP1R2P41236 205 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 GRK6P43250 576 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 CDK17Q00537 523 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 EIF4EBP2Q13542 120 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 SND1Q7KZF4 910 aaKnown RBP eCLIP16.38■□□□□ 0.214e-8■■■□□ 15.5
ERGIC3-217ENST00000488935 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 STK32AQ8WU08 396 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 FRS2Q8WU20 508 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 RPRD1AQ96P16 312 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 ELF4Q99607 663 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 MYOCQ99972 504 aa16.38■□□□□ 0.21
ERGIC3-217ENST00000488935 IRX2Q9BZI1 471 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms