RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 DEFB115Q30KQ5 88 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RAB6CQ53S08 254 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SPANXN3Q5MJ09 141 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 STXBP5Q5T5C0 1151 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 PRPF38BQ5VTL8 546 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 OTUD1Q5VV17 481 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 KIAA0319Q5VV43 1072 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SYPL2Q5VXT5 272 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 STEAP4Q687X5 459 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TIGD7Q6NT04 549 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TIFABQ6ZNK6 161 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 MARK2Q7KZI7 788 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TRPM8Q7Z2W7 1104 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 PID1Q7Z2X4 250 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CCDC91Q7Z6B0 441 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 LINC00523Q86TU6 105 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CAND1Q86VP6 1230 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 MON1AQ86VX9 555 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CHSY1Q86X52 802 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CTAGE3PQ8IX95 158 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 C10orf67Q8IYJ2 551 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 BANPQ8N9N5 519 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 GABPB2Q8TAK5 448 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RNF217Q8TC41 542 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 C2orf15Q8WU43 125 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 CCT6BQ92526 530 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RNF34Q969K3 372 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 APOPT1Q96IL0 206 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SIGLEC10Q96LC7 697 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 C8orf48Q96LL4 319 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SERPINB11Q96P15 392 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TSGA13Q96PP4 275 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RTP3Q9BQQ7 232 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 MRPL9Q9BYD2 267 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 ARHGAP39Q9C0H5 1083 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TKTL2Q9H0I9 626 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RAB6CQ9H0N0 254 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TRPV6Q9H1D0 765 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SMOC2Q9H3U7 446 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 PRDM12Q9H4Q4 367 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RETREG1Q9H6L5 497 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 C10orf88Q9H8K7 445 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 LRRC40Q9H9A6 602 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 WDR6Q9NNW5 1121 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 OLA1Q9NTK5 396 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 RNF186Q9NXI6 227 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 NSMCE4AQ9NXX6 385 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TXNDC16Q9P2K2 825 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 INPP5FQ9Y2H2 1132 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 AAR2Q9Y312 384 aaKnown RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 TIMM13Q9Y5L4 95 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-243ENST00000488923 MAD1L1Q9Y6D9 718 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 USH1CQ9Y6N9 552 aa6.8□□□□□ -1.32
HDLBP-243ENST00000488923 SCN1AP35498 2009 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 MGAMO43451 1857 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 MEIS3P2A8K0S8 358 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 H7C4K7 107 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ARVCFO00192 962 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 COPEO14579 308 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 KLF11O14901 512 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 DNAJC8O75937 253 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ANXA9O76027 345 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ALDH1A2O94788 518 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 RTN3O95197 1032 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 AP2A1O95782 977 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 FYNP06241 537 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ATP5BP06576 529 aaKnown RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 VAV1P15498 845 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ELNP15502 786 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 SELPP16109 830 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 BDNFP23560 247 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 CCNCP24863 283 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 EPHB2P29323 1055 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 GRIK1P39086 918 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 HADHAP40939 763 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 CCNFP41002 786 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 RASSF2P50749 326 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 MGAT5Q09328 741 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 MPP2Q14168 576 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ANO4Q32M45 955 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 KBTBD12Q3ZCT8 623 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 TTC31Q49AM3 519 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 HP1BP3Q5SSJ5 553 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ATG16L1Q676U5 607 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 NAPEPLDQ6IQ20 393 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ZNF280DQ6N043 979 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 MSANTD2Q6P1R3 559 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 LVRNQ6Q4G3 990 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 UNC5AQ6ZN44 842 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 LRRC8DQ7L1W4 858 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 BHLHA9Q7RTU4 235 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 ALYREFQ86V81 257 aaKnown RBP6.79□□□□□ -1.32
HDLBP-243ENST00000488923 LCA5Q86VQ0 697 aa6.79□□□□□ -1.32
HDLBP-243ENST00000488923 CCDC117Q8IWD4 279 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms