RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SGSHP51688 502 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 GAB4Q2WGN9 574 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 ITPRIPL2Q3MIP1 535 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 CCDC137Q6PK04 289 aaKnown RBP19.93■□□□□ 0.78
CCM2-216ENST00000488727 KDM7AQ6ZMT4 941 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 CPA6Q8N4T0 437 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 NTAN1Q96AB6 310 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 PRICKLE1Q96MT3 831 aaPredicted RBP19.93■□□□□ 0.78
CCM2-216ENST00000488727 HEBP1Q9NRV9 189 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 PCSK1NQ9UHG2 260 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 SNX10Q9Y5X0 201 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 PSTPIP1O43586 416 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 TSPAN3O60637 253 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 IL1R2P27930 398 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 PCK1P35558 622 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 SOX9P48436 509 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 ZDHHC24Q6UX98 284 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 LRRC31Q6UY01 552 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 CSGALNACT1Q8TDX6 532 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 BHMTQ93088 406 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 CAPS2Q9BXY5 557 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 SIK2Q9H0K1 926 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 GRHL1Q9NZI5 618 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 CWC15Q9P013 229 aaKnown RBP19.93■□□□□ 0.78
CCM2-216ENST00000488727 LCMT1Q9UIC8 334 aa19.93■□□□□ 0.78
CCM2-216ENST00000488727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCM2-216ENST00000488727 MIA3Q5JRA6 1907 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 TCRBV7S2A1N4TA0A589 114 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 TACR2P21452 398 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 PFKPQ01813 784 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 SCAPQ12770 1279 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 CEP85LQ5SZL2 805 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 ARTNQ5T4W7 220 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 TXNRD3NBQ6F5E7 133 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 CHSY1Q86X52 802 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 UBALD2Q8IYN6 164 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 HAPLN3Q96S86 360 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 FZD10Q9ULW2 581 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 USP18Q9UMW8 372 aa19.92■□□□□ 0.78
CCM2-216ENST00000488727 GOLGA6L10A6NI86 522 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 ADH1CP00326 375 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 MLLT6P55198 1093 aaPredicted RBP19.91■□□□□ 0.78
CCM2-216ENST00000488727 SLC25A11Q02978 314 aaKnown RBP19.91■□□□□ 0.78
CCM2-216ENST00000488727 DHX9Q08211 1270 aaKnown RBP19.91■□□□□ 0.78
CCM2-216ENST00000488727 ZNF844Q08AG5 666 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 MTA1Q13330 715 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 AUHQ13825 339 aaKnown RBP19.91■□□□□ 0.78
CCM2-216ENST00000488727 ARL13BQ3SXY8 428 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 FYB2Q5VWT5 728 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 FBXL22Q6P050 247 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 C14orf80Q86SX3 495 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 SNRNP25Q9BV90 132 aaKnown RBP19.91■□□□□ 0.78
CCM2-216ENST00000488727 TRIM31Q9BZY9 425 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 PLK2Q9NYY3 685 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 MARK1Q9P0L2 795 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 KIAA1549LQ6ZVL6 1849 aa19.91■□□□□ 0.78
CCM2-216ENST00000488727 PRPSAP2O60256 369 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 ADH5P11766 374 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 GJA4P35212 333 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 TAS2R40P59535 323 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 ZXDAP98168 799 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 ANO4Q32M45 955 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 AGBL2Q5U5Z8 902 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 NAIF1Q69YI7 327 aaPredicted RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 ZNF683Q8IZ20 524 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 LGI2Q8N0V4 545 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 PYROXD2Q8N2H3 581 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 UBLCP1Q8WVY7 318 aaPredicted RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 C1orf74Q96LT6 269 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 NCAPGQ9BPX3 1015 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 DDX50Q9BQ39 737 aaKnown RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 BBS2Q9BXC9 721 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 GPATCH2LQ9NWQ4 482 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 VANGL2Q9ULK5 521 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 SNX24Q9Y343 169 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 DOCK4Q8N1I0 1966 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 SHISA7A6NL88 538 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 NEDD8-MDP1E9PL57 170 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 FAM72CH0Y354 149 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 HOXC11O43248 304 aaPredicted RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 PENKP01210 267 aaPredicted RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 MYZAPP0CAP1 466 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 RPL21P46778 160 aaKnown RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 IRAK1P51617 712 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 AIF1P55008 147 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 EIF3BP55884 814 aaKnown RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 RPS24P62847 133 aaKnown RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 CA9Q16790 459 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 SMTNL2Q2TAL5 461 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 SLC44A4Q53GD3 710 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 KCNT1Q5JUK3 1230 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 FAM72AQ5TYM5 149 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 FAM72DQ6L9T8 149 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 SYDE1Q6ZW31 735 aaPredicted RBP19.9■□□□□ 0.78
CCM2-216ENST00000488727 C12orf40Q86WS4 652 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 FAM72BQ86X60 149 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 RHOT1Q8IXI2 618 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 KATNAL2Q8IYT4 538 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 IGSF8Q969P0 613 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 TMA16Q96EY4 203 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms