RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SRSF5Q13243 272 aaKnown RBP15.48■□□□□ 0.07
CXCL12-207ENST00000488591 PIGHQ14442 188 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-207ENST00000488591 PTPRNQ16849 979 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 H2AFVQ71UI9 128 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 TFAP2DQ7Z6R9 452 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 APCDD1Q8J025 514 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 KDM1BQ8NB78 822 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-207ENST00000488591 TBC1D31Q96DN5 1066 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 CHP1Q99653 195 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 FEM1AQ9BSK4 669 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 NUP85Q9BW27 656 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 TMEM245Q9H330 911 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 IP6K2Q9UHH9 426 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 VPS28Q9UK41 221 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 FZD10Q9ULW2 581 aa15.48■□□□□ 0.07
CXCL12-207ENST00000488591 PRR23AA6NEV1 266 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 PRPSAP2O60256 369 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ZNF217O75362 1048 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 LRIG2O94898 1065 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 RHOQP17081 205 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 MRE11P49959 708 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ASTE1Q2TB18 679 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ZNF783Q6ZMS7 281 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ALYREFQ86V81 257 aaKnown RBP15.47■□□□□ 0.07
CXCL12-207ENST00000488591 TC2NQ8N9U0 490 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 SUMF1Q8NBK3 374 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ERLEC1Q96DZ1 483 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 SPACA7Q96KW9 195 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 EPAS1Q99814 870 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 TRIM7Q9C029 511 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 FBRSQ9HAH7 460 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 PRDM16Q9HAZ2 1276 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 SLC25A13Q9UJS0 675 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ANAPC7Q9UJX3 599 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 NENFQ9UMX5 172 aa15.47■□□□□ 0.07
CXCL12-207ENST00000488591 SMG5Q9UPR3 1016 aaKnown RBP15.47■□□□□ 0.07
CXCL12-207ENST00000488591 ILVBLA1L0T0 632 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 EIF3CLB5ME19 914 aaKnown RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 FAM72CH0Y354 149 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 MYO1FO00160 1098 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 MAP3K13O43283 966 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 CREB3O43889 395 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 HLA-EP13747 358 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 NDUFV2P19404 249 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 PCK1P35558 622 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 CTSOP43234 321 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 MAPKAPK2P49137 400 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 ERMARDQ5T6L9 678 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 FAM72AQ5TYM5 149 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 MANEALQ5VSG8 457 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 FAM72DQ6L9T8 149 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 KIAA1324Q6UXG2 1013 aaKnown RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 ASCL5Q7RTU5 278 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 FAM72BQ86X60 149 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 TMPRSS6Q8IU80 811 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 PSTKQ8IV42 348 aaKnown RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 PRCCQ92733 491 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 EIF3CQ99613 913 aaKnown RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 C2orf49Q9BVC5 232 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-207ENST00000488591 CD248Q9HCU0 757 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 CTTNBP2NLQ9P2B4 639 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 UVRAGQ9P2Y5 699 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 LCMT1Q9UIC8 334 aa15.46■□□□□ 0.07
CXCL12-207ENST00000488591 RNASEH1O60930 286 aaKnown RBP15.45■□□□□ 0.06
CXCL12-207ENST00000488591 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 TMEM253P0C7T8 217 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ACADMP11310 421 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 EPHB2P29323 1055 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 MIPP30301 263 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 HTR7P34969 479 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ETFBP38117 255 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ELF2Q15723 593 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 BOLA3Q53S33 107 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 LAIR1Q6GTX8 287 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 PYROXD2Q8N2H3 581 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ZNF366Q8N895 744 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 OR52K2Q8NGK3 314 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 OR2T3Q8NH03 318 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ARHGEF26Q96DR7 871 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 ALG14Q96F25 216 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 SIPA1Q96FS4 1042 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 RPL10LQ96L21 214 aaKnown RBP15.45■□□□□ 0.06
CXCL12-207ENST00000488591 MRGPRX1Q96LB2 322 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 PANX2Q96RD6 677 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 HINFPQ9BQA5 517 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 SPON2Q9BUD6 331 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 MAGEB5Q9BZ81 275 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 DHX35Q9H5Z1 703 aaKnown RBP15.45■□□□□ 0.06
CXCL12-207ENST00000488591 CATSPERBQ9H7T0 1116 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 TMEM248Q9NWD8 314 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 DONSONQ9NYP3 566 aa15.45■□□□□ 0.06
CXCL12-207ENST00000488591 NCDNQ9UBB6 729 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms