RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SLC12A4Q9UP95 1085 aa4.41□□□□□ -1.7
CCDC66-221ENST00000487739 TRIP12Q14669 1992 aaPredicted RBP4.41□□□□□ -1.7
CCDC66-221ENST00000487739 RASA4BC9J798 803 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 APAF1O14727 1248 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 RASA4O43374 803 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 RPP40O75818 363 aaKnown RBP4.4□□□□□ -1.71
CCDC66-221ENST00000487739 LCATP04180 440 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 TRIM27P14373 513 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 ZP1P60852 638 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 DSC1Q08554 894 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 ARL13AQ5H913 290 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-221ENST00000487739 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.71
CCDC66-221ENST00000487739 PRAMEF19Q5SWL8 479 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 DCAF12L2Q5VW00 463 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 IZUMO3Q5VZ72 239 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 RINT1Q6NUQ1 792 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 CCAR1Q8IX12 1150 aaKnown RBP4.4□□□□□ -1.71
CCDC66-221ENST00000487739 FAM217AQ8IXS0 508 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 ENGASEQ8NFI3 743 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 WDR77Q9BQA1 342 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-221ENST00000487739 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 CDT1Q9H211 546 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 ZBTB1Q9Y2K1 713 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 PCDHGB1Q9Y5G3 927 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 SLC4A4Q9Y6R1 1079 aa4.4□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3DA0A087WVF3 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3IA0A087WXS9 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3EA0A087X179 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3KA0A087X1G2 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3BA6NDS4 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3FA6NER0 549 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3LB9A6J9 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 MYL3P08590 195 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3HP0C7X1 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 PEPDP12955 493 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 NPPBP16860 134 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 AKT1P31749 480 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TM4SF4P48230 202 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 ART1P52961 327 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 POLE2P56282 527 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 SELENOVP59797 346 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 RBM6P78332 1123 aaKnown RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 MPEG1Q2M385 716 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 ZNF569Q5MCW4 686 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 FNBP1LQ5T0N5 605 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 AAGABQ6PD74 315 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 FAM83HQ6ZRV2 1179 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 USP43Q70EL4 1123 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 C11orf96Q7Z7L8 435 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 CUZD1Q86UP6 607 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 CCDC25Q86WR0 208 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 NRSN1Q8IZ57 195 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 OR2C3Q8N628 320 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 CLEC18CQ8NCF0 446 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 DNASE2BQ8WZ79 361 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 PPP1R10Q96QC0 940 aaKnown RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 ZNF304Q9HCX3 659 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 MDFICQ9P1T7 246 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 DTX4Q9Y2E6 619 aa4.39□□□□□ -1.71
CCDC66-221ENST00000487739 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
CCDC66-221ENST00000487739 SHROOM4Q9ULL8 1493 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 PRSS2P07478 247 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 CHRNB2P17787 502 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 KLRK1P26718 216 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 TNFSF8P32971 234 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 HSPA7P48741 367 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 FAM3BP58499 235 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-221ENST00000487739 ABATP80404 500 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 TRAF1Q13077 416 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 LONRF1Q17RB8 773 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 DPP10Q8N608 796 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 ZBTB8BQ8NAP8 495 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-221ENST00000487739 KDM1BQ8NB78 822 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 PJA1Q8NG27 643 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 BICD2Q8TD16 824 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 IPO4Q8TEX9 1081 aaKnown RBP4.38□□□□□ -1.71
CCDC66-221ENST00000487739 B3GNT4Q9C0J1 378 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 RMI1Q9H9A7 625 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 CERS4Q9HA82 394 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 PLSCR4Q9NRQ2 329 aa4.38□□□□□ -1.71
CCDC66-221ENST00000487739 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 KIF28PB7ZC32 967 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 MS4A18H0YCH9 400 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 PIP5K1BO14986 540 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 GLUD1P00367 558 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 RFX5P48382 616 aaPredicted RBP4.37□□□□□ -1.71
CCDC66-221ENST00000487739 GLUD2P49448 558 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 RHAGQ02094 409 aa4.37□□□□□ -1.71
CCDC66-221ENST00000487739 RNASELQ05823 741 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms