RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 EPS8L3Q8TE67 593 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 AZIN2Q96A70 460 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TLCD1Q96CP7 247 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 MYEOVQ96EZ4 313 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 LRRC3Q9BY71 257 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SLC39A8Q9C0K1 460 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 RNF38Q9H0F5 515 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SEPT10Q9P0V9 454 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TRHDEQ9UKU6 1024 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TEX264Q9Y6I9 313 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CHD7Q9P2D1 2997 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CHD9Q3L8U1 2897 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 A0A087WUV0 522 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 HIDE1A8MVS5 230 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 DFFAO00273 331 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ACSL4O60488 711 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 AVILO75366 819 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 STC2O76061 302 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TSHRP16473 764 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 SLC6A4P31645 630 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CD68P34810 354 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 NDST2P52849 883 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 UBE3AQ05086 875 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 STAT4Q14765 748 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 BBS9Q3SYG4 887 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CCDC38Q502W7 563 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TEX44Q53QW1 395 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 HP1BP3Q5SSJ5 553 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 EMC10Q5UCC4 262 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CCDC149Q6ZUS6 474 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 SPRED2Q7Z698 418 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CHSY1Q86X52 802 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TMC8Q8IU68 726 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ANKMY2Q8IV38 441 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 IGDCC3Q8IVU1 814 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 MRPL43Q8N983 215 aaKnown RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ATP11CQ8NB49 1132 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 FBXO36Q8NEA4 188 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 FAM76AQ8TAV0 307 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 FATE1Q969F0 183 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF419Q96HQ0 510 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TEKT5Q96M29 485 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 C17orf80Q9BSJ5 609 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 NACA2Q9H009 215 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 GBA3Q9H227 469 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 EURLQ9NYK6 297 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 KLHL8Q9P2G9 620 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 NOTCH4Q99466 2003 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6L7A0A1B0GV03 622 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 RASGRF2O14827 1237 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 KLKB1P03952 638 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 C8AP07357 584 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 MLNP12872 115 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CA8P35219 290 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ELK3P41970 407 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 MTM1Q13496 603 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CAMK1Q14012 370 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 LONRF1Q17RB8 773 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 C6orf118Q5T5N4 469 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 PID1Q7Z2X4 250 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TFAP2DQ7Z6R9 452 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 KLHDC8BQ8IXV7 354 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 KREMEN2Q8NCW0 462 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 PYROXD1Q8WU10 500 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 POF1BQ8WVV4 589 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 RPRD1AQ96P16 312 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 IL12RB2Q99665 862 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 LBHD1Q9BQE6 289 aaPredicted RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 EMILIN2Q9BXX0 1053 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ENTPD7Q9NQZ7 604 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 TLR9Q9NR96 1032 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 DONSONQ9NYP3 566 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
SF3B1-211ENST00000487698 MIA3Q5JRA6 1907 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 E7EVH7 732 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 F5H5T6 163 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 MATN3O15232 486 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 CACNG3O60359 315 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 PEX11BO96011 259 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 GLUD1P00367 558 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 IVLP07476 585 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 GRIA1P42261 906 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 MAPKAPK2P49137 400 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 SLC11A2P49281 568 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 HARS2P49590 506 aaKnown RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 PAPOLAP51003 745 aaKnown RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 CLCN4P51793 760 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 PABPC1LQ4VXU2 614 aaKnown RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 KCTD11Q693B1 232 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 ITPRIPL1Q6GPH6 555 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 GAREM2Q75VX8 874 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 CNTD1Q8N815 330 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms