RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 HTR7P34969 479 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 NNMTP40261 264 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 CLCN6P51797 869 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 ZNF143P52747 638 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 HDAC4P56524 1084 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 UBASH3AP57075 661 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 RPS14P62263 151 aaKnown RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 ZNF33AQ06730 810 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 ZNF177Q13360 481 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 RSPO4Q2I0M5 234 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 AASDHQ4L235 1098 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 RNF219Q5W0B1 726 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 PLEKHA7Q6IQ23 1121 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 CIR1Q86X95 450 aaPredicted RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 FAM131BQ86XD5 332 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 APCDD1Q8J025 514 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 DCAF4L2Q8NA75 395 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 JOSD2Q8TAC2 188 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 FNIP1Q8TF40 1166 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 FAM131CQ96AQ9 280 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 FEM1AQ9BSK4 669 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 ZYG11BQ9C0D3 744 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 SEPT11Q9NVA2 429 aaKnown RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 SUSD2Q9UGT4 822 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 SLC25A13Q9UJS0 675 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 TPX2Q9ULW0 747 aaKnown RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 HS3ST2Q9Y278 367 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 INVSQ9Y283 1065 aa10.56□□□□□ -0.72
RNF220-215ENST00000487332 BZW2Q9Y6E2 419 aaKnown RBP10.56□□□□□ -0.72
RNF220-215ENST00000487332 NYNRINQ9P2P1 1898 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ILVBLA1L0T0 632 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 EIF3CLB5ME19 914 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 KHNYNO15037 678 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 RNASEH1O60930 286 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 ADH1BP00325 375 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 DNTTP04053 509 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 RHOCP08134 193 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 MYBL1P10243 752 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 MZF1P28698 734 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 ADRA1BP35368 520 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ETFBP38117 255 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 PTGER3P43115 390 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 IRAK1P51617 712 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 KRT83P78385 493 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ZBED6P86452 979 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ATP11AP98196 1134 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 KLHL30Q0D2K2 578 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ELAVL3Q14576 367 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 DUOXA1Q1HG43 343 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 C15orf59Q2T9L4 293 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 ALFQ53S48 1182 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 WDR45BQ5MNZ6 344 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 SYCP2LQ5T4T6 812 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 C9orf64Q5T6V5 341 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 HGSNATQ68CP4 663 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ZNF571Q7Z3V5 609 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 SLC41A1Q8IVJ1 513 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 TMEFF1Q8IYR6 380 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 FRMD1Q8N878 549 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 FRS2Q8WU20 508 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 FAM172AQ8WUF8 416 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 DNASE2BQ8WZ79 361 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 EIF3CQ99613 913 aaKnown RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 NCAPGQ9BPX3 1015 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 CNPY3Q9BT09 278 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 EDEM2Q9BV94 578 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
RNF220-215ENST00000487332 SIK2Q9H0K1 926 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 SLC6A17Q9H1V8 727 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 HAUS4Q9H6D7 363 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 SGK2Q9HBY8 427 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 PARVAQ9NVD7 372 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 TMEM248Q9NWD8 314 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 ADAMTS1Q9UHI8 967 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 FZD4Q9ULV1 537 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 CAPN11Q9UMQ6 739 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 SCINQ9Y6U3 715 aa10.55□□□□□ -0.72
RNF220-215ENST00000487332 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.54□□□□□ -0.72
RNF220-215ENST00000487332 LNP1A1A4G5 178 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 CCP110O43303 1012 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 SIN3BO75182 1162 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 RTN2O75298 545 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 NDUFS2O75306 463 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 CNTN5O94779 1100 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 RHOQP17081 205 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 RRM1P23921 792 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 GGCXP38435 758 aa10.54□□□□□ -0.72
RNF220-215ENST00000487332 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms