RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 UBE4BO95155 1302 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 A0A1B0GTL3 188 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SLC7A4O43246 635 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 STX6O43752 255 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 VPS4BO75351 444 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 CST3P01034 146 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SYT1P21579 422 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 GARTP22102 1010 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SLC6A4P31645 630 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 CCKBRP32239 447 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PSEN1P49768 467 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 TOB1P50616 345 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 KCNA1Q09470 495 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 DRAP1Q14919 205 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 ZRSR1Q15695 479 aaKnown RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SETMARQ53H47 684 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 TADA2BQ86TJ2 420 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 GPBP1Q86WP2 473 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 ZNF548Q8NEK5 533 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 WFDC5Q8TCV5 224 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PLIN2Q99541 437 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 EPAS1Q99814 870 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 B3GNT4Q9C0J1 378 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 STOML2Q9UJZ1 356 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 VPS4AQ9UN37 437 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 R3HCC1Q9Y3T6 440 aaKnown RBP12.12□□□□□ -0.47
TRIM56-204ENST00000487252 PCDHB11Q9Y5F2 797 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
TRIM56-204ENST00000487252 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 TMX2-CTNND1H3BSU7 103 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 TPP1O14773 563 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 STAU1O95793 577 aaKnown RBP12.11□□□□□ -0.47
TRIM56-204ENST00000487252 TNNC2P02585 160 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
TRIM56-204ENST00000487252 ITGB7P26010 798 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 CD82P27701 267 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 CD70P32970 193 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 PSMD8P48556 350 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 MAP3K7CLP57077 242 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 HNRNPKP61978 463 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRIM56-204ENST00000487252 NR0B2Q15466 257 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 DUOXA2Q1HG44 320 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 NAT6Q93015 286 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 CCDC3Q9BQI4 270 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 MED10Q9BTT4 135 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 PREBQ9HCU5 417 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 MTMR6Q9Y217 621 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 PCDHA5Q9Y5H7 936 aa12.11□□□□□ -0.47
TRIM56-204ENST00000487252 PRRC2CQ9Y520 2896 aaKnown RBP12.11□□□□□ -0.47
TRIM56-204ENST00000487252 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 PRR19A6NJB7 356 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 C9orf172C9J069 976 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 JAK2O60674 1132 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 F13A1P00488 732 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 GJB2P29033 226 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 POM121L1PQ3SYA9 428 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 LACTB2Q53H82 288 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 TRAPPC11Q7Z392 1133 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 ABI3BPQ7Z7G0 1075 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 TNIP3Q96KP6 325 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 CDK5RAP1Q96SZ6 601 aaKnown RBP12.1□□□□□ -0.47
TRIM56-204ENST00000487252 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 STRADBQ9C0K7 418 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 XYLT2Q9H1B5 865 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 EPB41L5Q9HCM4 733 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 PISDQ9UG56 409 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 NAGPAQ9UK23 515 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 KIF3AQ9Y496 699 aa12.1□□□□□ -0.47
TRIM56-204ENST00000487252 EDDM13A0A1B0GTR0 161 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 D6RAR5 112 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 MUSKO15146 869 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 CSF2P04141 144 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms