RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MON1BQ7L1V2 547 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 BNIPLQ7Z465 357 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 KIAA0907Q7Z7F0 614 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 CACUL1Q86Y37 369 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 MFN1Q8IWA4 741 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 CARNMT1Q8N4J0 409 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 ATP6V0D2Q8N8Y2 350 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 RNF214Q8ND24 703 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 OR52K2Q8NGK3 314 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 CCDC26Q8TAB7 109 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 RUBCNQ92622 972 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 RNF34Q969K3 372 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 IGSF8Q969P0 613 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 SLC2A11Q9BYW1 496 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 MTG2Q9H4K7 406 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 ELOVL2Q9NXB9 296 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 IFNKQ9P0W0 207 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 BCCIPQ9P287 314 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 THAP10Q9P2Z0 257 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 NCDNQ9UBB6 729 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 INTS6Q9UL03 887 aaKnown RBP7.4□□□□□ -1.22
UBE4B-209ENST00000487244 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 STON1Q9Y6Q2 735 aa7.4□□□□□ -1.22
UBE4B-209ENST00000487244 ADAMTS9Q9P2N4 1935 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CCDC163A0A0D9SF12 145 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 C2CD4BA6NLJ0 364 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 FIGNL2A6NMB9 653 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 TMCO5BA8MYB1 307 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 F5H5T6 163 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 GOLGA6L19H0YKK7 550 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 LUC7L3O95232 432 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 PLEKP08567 350 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 SKILP12757 684 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 FERP16591 822 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ABCB4P21439 1286 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 TGM1P22735 817 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 RRM1P23921 792 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 GBP1P32455 592 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CNR2P34972 360 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 RFC1P35251 1148 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CSKP41240 450 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 PTGIRP43119 386 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CTSOP43234 321 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 UBASH3AP57075 661 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 DEUP1Q05D60 604 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 SPEM2Q0P670 501 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CDH18Q13634 790 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 EIF4HQ15056 248 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ASIC2Q16515 512 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CDO1Q16878 200 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 PLK5Q496M5 336 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CCDC14Q49A88 953 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 SFMBT2Q5VUG0 894 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MBLAC2Q68D91 279 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 LAIR1Q6GTX8 287 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CXorf57Q6NSI4 855 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ZNF571Q7Z3V5 609 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 TRMT11Q7Z4G4 463 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 FAM131BQ86XD5 332 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 KIAA2013Q8IYS2 634 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ZNF683Q8IZ20 524 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 APCDD1Q8J025 514 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CCAR2Q8N163 923 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 PGBD3Q8N328 593 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MSANTD4Q8NCY6 345 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 FIBINQ8TAL6 211 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 RXFP2Q8WXD0 754 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 PGAP3Q96FM1 320 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MYO19Q96H55 970 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MRGPRX1Q96LB2 322 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 INSM2Q96T92 566 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 DDX50Q9BQ39 737 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MAGEB5Q9BZ81 275 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 XPO4Q9C0E2 1151 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MKRN2Q9H000 416 aaKnown RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 TKTL2Q9H0I9 626 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 SIK2Q9H0K1 926 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 DUSP15Q9H1R2 295 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 HAUS4Q9H6D7 363 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ARHGEF38Q9NXL2 777 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 ADAM22Q9P0K1 906 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MBD1Q9UIS9 605 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-209ENST00000487244 STAP1Q9ULZ2 295 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 MYO6Q9UM54 1294 aa7.39□□□□□ -1.23
UBE4B-209ENST00000487244 CNOT1A5YKK6 2376 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 KNL1Q8NG31 2342 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TYW5A2RUC4 315 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 H0Y626 953 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 DDX3XO00571 662 aaKnown RBP eCLIP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CNTN5O94779 1100 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms