RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 TCEAL6Q6IPX3 200 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 PPP1R2P3Q6NXS1 205 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 DCUN1D2Q6PH85 259 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 STRADAQ7RTN6 431 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 TFAP2DQ7Z6R9 452 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 DNAAF5Q86Y56 855 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 OR52K2Q8NGK3 314 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 TCEAL3Q969E4 200 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 C1orf74Q96LT6 269 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 PPP1R9BQ96SB3 815 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 USP36Q9P275 1121 aaKnown RBP23.04■■□□□ 1.28
CDHR3-212ENST00000487084 VPS28Q9UK41 221 aa23.04■■□□□ 1.28
CDHR3-212ENST00000487084 CDV3Q9UKY7 258 aaKnown RBP23.04■■□□□ 1.28
CDHR3-212ENST00000487084 CKAP5Q14008 2032 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 RALGAPA1Q6GYQ0 2036 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TTC34A8MYJ7 566 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 ATMINO43313 823 aaPredicted RBP23.03■■□□□ 1.28
CDHR3-212ENST00000487084 GDF9O60383 454 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 FOXD2O60548 495 aaPredicted RBP23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TPM3P06753 285 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 RHOCP08134 193 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 PRKCIP41743 596 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TPMTP51580 245 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 SULT2A1Q06520 285 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TDRD12Q587J7 1177 aaKnown RBP23.03■■□□□ 1.28
CDHR3-212ENST00000487084 METTL3Q86U44 580 aaKnown RBP23.03■■□□□ 1.28
CDHR3-212ENST00000487084 FAM124AQ86V42 546 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 ZNF683Q8IZ20 524 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TOE1Q96GM8 510 aaKnown RBP23.03■■□□□ 1.28
CDHR3-212ENST00000487084 FBRSQ9HAH7 460 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 ITM2CQ9NQX7 267 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 SLCO3A1Q9UIG8 710 aa23.03■■□□□ 1.28
CDHR3-212ENST00000487084 TCRBV5S1A1TA0A578 114 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 CCP110O43303 1012 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 SIN3BO75182 1162 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 NNMTP40261 264 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 HDAC4P56524 1084 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 RPL7AP62424 266 aaKnown RBP23.02■■□□□ 1.28
CDHR3-212ENST00000487084 ZNF33AQ06730 810 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 NFKBIBQ15653 356 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 HNRNPA1L2Q32P51 320 aaKnown RBP23.02■■□□□ 1.28
CDHR3-212ENST00000487084 SPDYCQ5MJ68 293 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 LRSAM1Q6UWE0 723 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 KDM1BQ8NB78 822 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 RNF214Q8ND24 703 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 HSPA12BQ96MM6 686 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 FEM1AQ9BSK4 669 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 XPO4Q9C0E2 1151 aaKnown RBP23.02■■□□□ 1.28
CDHR3-212ENST00000487084 SLC25A13Q9UJS0 675 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 CEP250Q9BV73 2442 aa23.02■■□□□ 1.28
CDHR3-212ENST00000487084 SPTBN4Q9H254 2564 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 EDDM13A0A1B0GTR0 161 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 A0A1W2PQJ5 194 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 DRGXA6NNA5 263 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 DDX3XO00571 662 aaKnown RBP eCLIP23.01■■□□□ 1.272e-8■■□□□ 11.6
CDHR3-212ENST00000487084 DNTTP04053 509 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 DESP17661 470 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 ITPKAP23677 461 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 OR1E1P30953 314 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 ADRA1BP35368 520 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 ZNF143P52747 638 aaPredicted RBP23.01■■□□□ 1.27
CDHR3-212ENST00000487084 PLK1P53350 603 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 ZNF776Q68DI1 518 aaPredicted RBP23.01■■□□□ 1.27
CDHR3-212ENST00000487084 SCYL2Q6P3W7 929 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 CCDC185Q8N715 623 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 CENPIQ92674 756 aaPredicted RBP23.01■■□□□ 1.27
CDHR3-212ENST00000487084 TBC1D30Q9Y2I9 924 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 PLXND1Q9Y4D7 1925 aa23.01■■□□□ 1.27
CDHR3-212ENST00000487084 IGLV3-10A0A075B6K4 115 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 PATE3B3GLJ2 98 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 RNASEH1O60930 286 aaKnown RBP23■■□□□ 1.27
CDHR3-212ENST00000487084 OXTRP30559 389 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 RPS14P62263 151 aaKnown RBP23■■□□□ 1.27
CDHR3-212ENST00000487084 TTC31Q49AM3 519 aaPredicted RBP23■■□□□ 1.27
CDHR3-212ENST00000487084 C6orf118Q5T5N4 469 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 RWDD4Q6NW29 188 aaKnown RBP23■■□□□ 1.27
CDHR3-212ENST00000487084 SYT12Q8IV01 421 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 NETO1Q8TDF5 533 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 IQCDQ96DY2 449 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 ALG14Q96F25 216 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 VCPIP1Q96JH7 1222 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23■■□□□ 1.27
CDHR3-212ENST00000487084 GPR174Q9BXC1 333 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 ZYG11BQ9C0D3 744 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 RXFP3Q9NSD7 469 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 PARVAQ9NVD7 372 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 WSB2Q9NYS7 404 aaPredicted RBP23■■□□□ 1.27
CDHR3-212ENST00000487084 OR12D3Q9UGF7 316 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 ITIH6Q6UXX5 1313 aa23■■□□□ 1.27
CDHR3-212ENST00000487084 KHNYNO15037 678 aaKnown RBP22.99■■□□□ 1.27
CDHR3-212ENST00000487084 FTLP02792 175 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-212ENST00000487084 SDHBP21912 280 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 ZBED6P86452 979 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 ACCSLQ4AC99 568 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 PPP1R15BQ5SWA1 713 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 C9orf64Q5T6V5 341 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 SETD3Q86TU7 594 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-212ENST00000487084 SLC41A1Q8IVJ1 513 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 RGL4Q8IZJ4 473 aa22.99■■□□□ 1.27
CDHR3-212ENST00000487084 GANCQ8TET4 914 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms