RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ECT2LQ008S8 904 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SFSWAPQ12872 951 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 NME3Q13232 169 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 AUHQ13825 339 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SLC25A52Q3SY17 297 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 FAM102AQ5T9C2 384 aaPredicted RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SH3PXD2AQ5TCZ1 1133 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 DCAF12L1Q5VU92 463 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 CXorf57Q6NSI4 855 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 PSAPL1Q6NUJ1 521 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 USP30Q70CQ3 517 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 PIP4P1Q86T03 277 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 ERICH1Q86X53 443 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 CACUL1Q86Y37 369 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 XYLT1Q86Y38 959 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 APCDD1Q8J025 514 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SGK2Q9HBY8 427 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 DNAAF2Q9NVR5 837 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 ARHGEF38Q9NXL2 777 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 LIMA1Q9UHB6 759 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SIK3Q9Y2K2 1263 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 HS3ST4Q9Y661 456 aa14.86□□□□□ -0.03
CLDN11-207ENST00000486975 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 LRRC10BA6NIK2 292 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 RNASEH1O60930 286 aaKnown RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 SIN3BO75182 1162 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 CLDN11O75508 207 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 ZNF18P17022 549 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 ACSL1P33121 698 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 COPB1P53618 953 aaKnown RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 JAM2P57087 298 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 CDR2Q01850 454 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 SLC14A1Q13336 389 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 UAP1L1Q3KQV9 507 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 CCDC183Q5T5S1 534 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 TAF3Q5VWG9 929 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 BNIPLQ7Z465 357 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 MINDY1Q8N5J2 469 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 ANKRD20A12PQ8NF67 263 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 C1orf216Q8TAB5 229 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 IGSF8Q969P0 613 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 RPRD1AQ96P16 312 aaPredicted RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 BTBD1Q9H0C5 482 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 PABPC3Q9H361 631 aaKnown RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 OSGEPQ9NPF4 335 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 TMEM59LQ9UK28 342 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 TBC1D30Q9Y2I9 924 aa14.85□□□□□ -0.03
CLDN11-207ENST00000486975 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 ASCC3Q8N3C0 2202 aaKnown RBP14.85□□□□□ -0.03
CLDN11-207ENST00000486975 LGALS16A8MUM7 142 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 MAP3K7O43318 606 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 OPHN1O60890 802 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 GJB3O75712 270 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SEMA4FO95754 770 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 CYP1A1P04798 512 aaPredicted RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 MMEP08473 750 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 MAOBP27338 520 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SOX5P35711 763 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 FLT3P36888 993 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 NNMTP40261 264 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 CTSOP43234 321 aaPredicted RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 KLK7P49862 253 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SULT1E1P49888 294 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 POLR2FP61218 127 aaKnown RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 CENPCQ03188 943 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 CST6Q15828 149 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 TSR1Q2NL82 804 aaKnown RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 TRIM72Q6ZMU5 477 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SND1Q7KZF4 910 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 FAM124AQ86V42 546 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 CIR1Q86X95 450 aaPredicted RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 HDDC3Q8N4P3 179 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 ZCCHC9Q8N567 271 aaKnown RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 ALG14Q96F25 216 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 C1orf74Q96LT6 269 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 GTPBP2Q9BX10 602 aaKnown RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 MTG2Q9H4K7 406 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SLC32A1Q9H598 525 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 WDCPQ9H6R7 721 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 FSCN3Q9NQT6 498 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 FAM207AQ9NSI2 230 aaPredicted RBP14.84□□□□□ -0.03
CLDN11-207ENST00000486975 WDR70Q9NW82 654 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 ADAMTS1Q9UHI8 967 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 SLCO3A1Q9UIG8 710 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 ANGPTL2Q9UKU9 493 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 OR51B4Q9Y5P0 310 aa14.84□□□□□ -0.03
CLDN11-207ENST00000486975 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.83□□□□□ -0.04
CLDN11-207ENST00000486975 TTC34A8MYJ7 566 aa14.83□□□□□ -0.04
CLDN11-207ENST00000486975 C10orf142B7Z368 130 aa14.83□□□□□ -0.04
CLDN11-207ENST00000486975 I6L893 689 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms