RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZYG11BQ9C0D3 744 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 CARD9Q9H257 536 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
HDAC6-229ENST00000486665 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 DCLK1O15075 740 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 CEP104O60308 925 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 PENKP01210 267 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 TUBB4AP04350 444 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 PRLRP16471 622 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 RHOQP17081 205 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 HTR7P34969 479 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 COPS2P61201 443 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 RUNX3Q13761 415 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 PPP2R5EQ16537 467 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 GAB4Q2WGN9 574 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 ANO4Q32M45 955 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 TFAP2DQ7Z6R9 452 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 MAML2Q8IZL2 1156 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 HJURPQ8NCD3 748 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
HDAC6-229ENST00000486665 KLC2Q9H0B6 622 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 MARK1Q9P0L2 795 aa13.14□□□□□ -0.31
HDAC6-229ENST00000486665 NEDD8-MDP1E9PL57 170 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-229ENST00000486665 CST8O60676 142 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 NFATC1O95644 943 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 CYBBP04839 570 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 SP9P0CG40 484 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 TYRP14679 529 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 PTPN7P35236 360 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 CDH4P55283 916 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 DYNLT1P63172 113 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 FSCBQ5H9T9 825 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 SLC13A5Q86YT5 568 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-229ENST00000486665 TP53INP2Q8IXH6 220 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 DCLK2Q8N568 766 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
HDAC6-229ENST00000486665 OR52K2Q8NGK3 314 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 BBS2Q9BXC9 721 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 NOL6Q9H6R4 1146 aaKnown RBP13.13□□□□□ -0.31
HDAC6-229ENST00000486665 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 BRD9Q9H8M2 597 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 TMEM248Q9NWD8 314 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-229ENST00000486665 SAR1BQ9Y6B6 198 aa13.13□□□□□ -0.31
HDAC6-229ENST00000486665 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 TRIM24O15164 1050 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 CLDN11O75508 207 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 LMNAP02545 664 aaKnown RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 ADH5P11766 374 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 CETN2P41208 172 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SLC6A11P48066 632 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 FOXK2Q01167 660 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 GBE1Q04446 702 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 GAD2Q05329 585 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SLC10A2Q12908 348 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 MPP7Q5T2T1 576 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SEL1L2Q5TEA6 688 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SLC9A4Q6AI14 798 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 C1orf228Q6PIY5 440 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 CHST9Q7L1S5 443 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 NPWQ8N729 165 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 PLD5Q8N7P1 536 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms