RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 IQCGQ9H095 443 aaKnown RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 HIPK3Q9H422 1215 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 UGT1A7Q9HAW7 530 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 UGT1A10Q9HAW8 530 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 UGT1A8Q9HAW9 530 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 OSER1Q9NX31 292 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 MARCH5Q9NX47 278 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 TLR6Q9Y2C9 796 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 FNDC1Q4ZHG4 1894 aaPredicted RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 TET1Q8NFU7 2136 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 CXCL10P02778 98 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 POLBP06746 335 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 SLC2A3P11169 496 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 NFKB1P19838 968 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 CCNCP24863 283 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ETV4P43268 484 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ELAVL2Q12926 359 aaKnown RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 SPANXN3Q5MJ09 141 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 SDHAF4Q5VUM1 108 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ZNF449Q6P9G9 518 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 CHSY1Q86X52 802 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 NPAS4Q8IUM7 802 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ATPAF2Q8N5M1 289 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 TOX2Q96NM4 488 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 GPR62Q9BZJ7 368 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 CASS4Q9NQ75 786 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 PIH1D1Q9NWS0 290 aaKnown RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 IL37Q9NZH6 218 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 KLHL14Q9P2G3 628 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 SCN5AQ14524 2016 aa20.83■□□□□ 0.93
HPS3-206ENST00000486530 ARHGAP42A6NI28 874 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 GSTA1P08263 222 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 HSPA8P11142 646 aaKnown RBP20.83■□□□□ 0.92
HPS3-206ENST00000486530 SLC11A1P49279 550 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 LBX1P52954 281 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 TLE2Q04725 743 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 PRPSAP1Q14558 356 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 SPRED3Q2MJR0 410 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 RNF43Q68DV7 783 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 ARHGAP12Q8IWW6 846 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 OR52K1Q8NGK4 314 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 TMEM175Q9BSA9 504 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 BFARQ9NZS9 450 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 CAPN7Q9Y6W3 813 aa20.83■□□□□ 0.92
HPS3-206ENST00000486530 NYNRINQ9P2P1 1898 aaKnown RBP20.83■□□□□ 0.92
HPS3-206ENST00000486530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 DFFAO00273 331 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 RFPL1O75677 317 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 GATMP50440 423 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 CCL23P55773 120 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 SMARCB1Q12824 385 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 BMPR2Q13873 1038 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 TRIM60Q495X7 471 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 FUT10Q6P4F1 479 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 ZNF276Q8N554 614 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 GBP7Q8N8V2 638 aaPredicted RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 STKLD1Q8NE28 680 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 ZSCAN18Q8TBC5 510 aaPredicted RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 SPPL2BQ8TCT7 592 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 SLC39A13Q96H72 371 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 ZNF333Q96JL9 665 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 C1orf74Q96LT6 269 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 SRPK1Q96SB4 655 aaKnown RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 MLPHQ9BV36 600 aaPredicted RBP20.82■□□□□ 0.92
HPS3-206ENST00000486530 LRRC40Q9H9A6 602 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 SLCO1B3Q9NPD5 702 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 ABCF3Q9NUQ8 709 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 GMIPQ9P107 970 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 NUDT5Q9UKK9 219 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 VANGL2Q9ULK5 521 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 HS3ST4Q9Y661 456 aa20.82■□□□□ 0.92
HPS3-206ENST00000486530 FAM92AA1XBS5 289 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 E9PAM4 449 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 AP3B1O00203 1094 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 PSMD3O43242 534 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 RTN3O95197 1032 aaPredicted RBP20.81■□□□□ 0.92
HPS3-206ENST00000486530 MOCS2O96007 188 aaPredicted RBP20.81■□□□□ 0.92
HPS3-206ENST00000486530 JCHAINP01591 159 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 CPB1P15086 417 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 SCTRP47872 440 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 USP46P62068 366 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 TIFABQ6ZNK6 161 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 CCDC63Q8NA47 563 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 ATAD1Q8NBU5 361 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 FAM111AQ96PZ2 611 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 HAUS2Q9NVX0 235 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 FNIP2Q9P278 1114 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 DOCK4Q8N1I0 1966 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 YWHAQP27348 245 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 TUBP50607 506 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 MGAT5Q09328 741 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 FRG1Q14331 258 aaKnown RBP20.81■□□□□ 0.92
HPS3-206ENST00000486530 ARTNQ5T4W7 220 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 C1orf53Q5VUE5 145 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 KLHDC8BQ8IXV7 354 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 RTL3Q8N8U3 475 aaKnown RBP20.81■□□□□ 0.92
HPS3-206ENST00000486530 DNAAF3Q8N9W5 541 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 OXCT2Q9BYC2 517 aaPredicted RBP20.81■□□□□ 0.92
HPS3-206ENST00000486530 C12orf65Q9H3J6 166 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms