RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 A0A1W2PPC4 97 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 FAM47DPA6NHR8 397 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 DAB1O75553 588 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 RNASEH2AO75792 299 aaKnown RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 MZF1P28698 734 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 NNMTP40261 264 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 CTSKP43235 329 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 STK19P49842 368 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 SLC6A3Q01959 620 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 AUHQ13825 339 aaKnown RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 SUZ12Q15022 739 aaKnown RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 PTPN20Q4JDL3 420 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 DPY19L2P1Q6NXN4 242 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 NCEH1Q6PIU2 408 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 LAYNQ6UX15 382 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 SLC26A9Q7LBE3 791 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 FAM114A1Q8IWE2 563 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 FAM71AQ8IYT1 594 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 STK40Q8N2I9 435 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 PNPLA1Q8N8W4 532 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 ZNF397Q8NF99 534 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 OR2T34Q8NGX1 318 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 ZCCHC14Q8WYQ9 949 aaKnown RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 IGSF8Q969P0 613 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 OMDQ99983 421 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 NDST4Q9H3R1 872 aa23.11■■□□□ 1.29
SREBF1-214ENST00000486311 RALYQ9UKM9 306 aaKnown RBP23.11■■□□□ 1.29
SREBF1-214ENST00000486311 LRRC72A6NJI9 287 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 ADH1BP00325 375 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 PNMA6AP0CW24 399 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-214ENST00000486311 GOT1P17174 413 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 C5AR1P21730 350 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 NOS2P35228 1153 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 PSMD8P48556 350 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 VASPP50552 380 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-214ENST00000486311 RACK1P63244 317 aaKnown RBP23.1■■□□□ 1.29
SREBF1-214ENST00000486311 ELAVL3Q14576 367 aaKnown RBP23.1■■□□□ 1.29
SREBF1-214ENST00000486311 VWA3BQ502W6 1294 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 KCNT1Q5JUK3 1230 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 SLCO6A1Q86UG4 719 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 AADATQ8N5Z0 425 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 RHBDD1Q8TEB9 315 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 RPRD1AQ96P16 312 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-214ENST00000486311 CDC6Q99741 560 aa23.1■■□□□ 1.29
SREBF1-214ENST00000486311 VILLO15195 856 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 ERCC5P28715 1186 aaPredicted RBP23.09■■□□□ 1.29
SREBF1-214ENST00000486311 CCT8P50990 548 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 BPIFB4P59827 614 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 CENPCQ03188 943 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 NME3Q13232 169 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 MIIPQ5JXC2 388 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 SND1Q7KZF4 910 aaKnown RBP eCLIP23.09■■□□□ 1.294e-7■■■□□ 15.6
SREBF1-214ENST00000486311 ADAT2Q7Z6V5 191 aaKnown RBP23.09■■□□□ 1.29
SREBF1-214ENST00000486311 ZDHHC17Q8IUH5 632 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 FRS2Q8WU20 508 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 ALG14Q96F25 216 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 PPP1R9BQ96SB3 815 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 SYNCQ9H7C4 482 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 EBF2Q9HAK2 575 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 HS3ST4Q9Y661 456 aa23.09■■□□□ 1.29
SREBF1-214ENST00000486311 KNL1Q8NG31 2342 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 H0Y8X5 98 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 KCNK3O14649 394 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 PCDHGA12O60330 932 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 VAV1P15498 845 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 NUMBP49757 651 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 CCR5P51681 352 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 DPCR1Q3MIW9 517 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 C5orf22Q49AR2 442 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 OTUD1Q5VV17 481 aaPredicted RBP23.08■■□□□ 1.29
SREBF1-214ENST00000486311 SLC6A18Q96N87 628 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 SPAG5Q96R06 1193 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 TUBGCP2Q9BSJ2 902 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 FEM1AQ9BSK4 669 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 ACE2Q9BYF1 805 aaPredicted RBP23.08■■□□□ 1.29
SREBF1-214ENST00000486311 PLCB1Q9NQ66 1216 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 TOR4AQ9NXH8 423 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 RRN3Q9NYV6 651 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 VANGL2Q9ULK5 521 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 BTBD3Q9Y2F9 522 aa23.08■■□□□ 1.29
SREBF1-214ENST00000486311 SRRM3A6NNA2 597 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-214ENST00000486311 M0QYT0 321 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 PAGE1O75459 146 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 DKK1O94907 266 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 IL1BP01584 269 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-214ENST00000486311 CDH5P33151 784 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-214ENST00000486311 IRAK1P51617 712 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 ADPRHP54922 357 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 C21orf59P57076 290 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 KCNJ12Q14500 433 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 C14orf80Q86SX3 495 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 TMEM35BQ8NCS4 154 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 FAM131CQ96AQ9 280 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 NPY6RQ99463 290 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 DACH1Q9UI36 760 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 TPX2Q9ULW0 747 aaKnown RBP23.07■■□□□ 1.28
SREBF1-214ENST00000486311 OR51B4Q9Y5P0 310 aa23.07■■□□□ 1.28
SREBF1-214ENST00000486311 FREM2Q5SZK8 3169 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms