RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 CCDC15Q0P6D6 951 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 SYCP1Q15431 976 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 CST6Q15828 149 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 FBXL22Q6P050 247 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 PIP4P1Q86T03 277 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 SETD3Q86TU7 594 aaPredicted RBP14.04□□□□□ -0.16
DCLK1-207ENST00000486239 XYLT1Q86Y38 959 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 ZNF366Q8N895 744 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 C2orf49Q9BVC5 232 aaPredicted RBP14.04□□□□□ -0.16
DCLK1-207ENST00000486239 MIR1-1HGQ9H1L0 117 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 RETREG1Q9H6L5 497 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 FBXL12Q9NXK8 326 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 COX16Q9P0S2 106 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 ADAMTS1Q9UHI8 967 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 HS3ST4Q9Y661 456 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 CEP295Q9C0D2 2601 aa14.04□□□□□ -0.16
DCLK1-207ENST00000486239 LGALS16A8MUM7 142 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 SLC7A4O43246 635 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 DFNA5O60443 496 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PAGE1O75459 146 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PNMA6AP0CW24 399 aaPredicted RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PDGFRAP16234 1089 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 CD27P26842 260 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 SOX5P35711 763 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 POLR2FP61218 127 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PITX1P78337 314 aaPredicted RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 C6orf118Q5T5N4 469 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 CXorf57Q6NSI4 855 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PPP1R2P3Q6NXS1 205 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 ZNF783Q6ZMS7 281 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 NOP9Q86U38 636 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 FAM124AQ86V42 546 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 DHX40Q8IX18 779 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 NEK11Q8NG66 645 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 OR2T34Q8NGX1 318 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 GPT2Q8TD30 523 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 GANCQ8TET4 914 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 SNX19Q92543 992 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 MYEOVQ96EZ4 313 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 HAPLN3Q96S86 360 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 OMDQ99983 421 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 VPS16Q9H269 839 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 GANQ9H2C0 597 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 KDM4CQ9H3R0 1056 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PIGVQ9NUD9 493 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
DCLK1-207ENST00000486239 PCDHGB2Q9Y5G2 931 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 DOCK4Q8N1I0 1966 aa14.03□□□□□ -0.16
DCLK1-207ENST00000486239 NUMA1Q14980 2115 aa14.02□□□□□ -0.16
DCLK1-207ENST00000486239 CXorf51AA0A1B0GTR3 108 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 C1QTNF3-AMACRE9PGA6 284 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 GJB3O75712 270 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 GOT1P17174 413 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 DESP17661 470 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 ACSL1P33121 698 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 ETFBP38117 255 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 CLCN6P51797 869 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 JAM2P57087 298 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 SUZ12Q15022 739 aaKnown RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 ZNF423Q2M1K9 1284 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 INAVAQ3KP66 663 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 ARL13BQ3SXY8 428 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 TAF3Q5VWG9 929 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 MMS22LQ6ZRQ5 1243 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 OR8D1Q8WZ84 308 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 CNTNAP3BQ96NU0 1288 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 FEM1AQ9BSK4 669 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 CNTNAP3Q9BZ76 1288 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 MUC3BQ9H195 1237 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 C6orf106Q9H6K1 298 aaPredicted RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 FAM207AQ9NSI2 230 aaPredicted RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 NOCTQ9UK39 431 aaKnown RBP14.02□□□□□ -0.17
DCLK1-207ENST00000486239 HS3ST2Q9Y278 367 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 PCDHB9Q9Y5E1 797 aa14.02□□□□□ -0.17
DCLK1-207ENST00000486239 CACNA1BQ00975 2339 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 ATP9BO43861 1147 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 CYP1A1P04798 512 aaPredicted RBP14.01□□□□□ -0.17
DCLK1-207ENST00000486239 RHOCP08134 193 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 MMP8P22894 467 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 MAOBP27338 520 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 MZF1P28698 734 aaPredicted RBP14.01□□□□□ -0.17
DCLK1-207ENST00000486239 SDC4P31431 198 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 SLC8A1P32418 973 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 NSFP46459 744 aaKnown RBP14.01□□□□□ -0.17
DCLK1-207ENST00000486239 CCR5P51681 352 aa14.01□□□□□ -0.17
DCLK1-207ENST00000486239 COPB1P53618 953 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms