RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 CA5BQ9Y2D0 317 aa8.6□□□□□ -1.03
XRN1-212ENST00000486211 F8P00451 2351 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 MED13Q9UHV7 2174 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ATP8B3O60423 1300 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SETD2Q9BYW2 2564 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 DOCK9Q9BZ29 2069 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 A8MXQ7 604 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 HHLA1C9JL84 531 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 PLD2O14939 933 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SCAMP1O15126 338 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 AGFG2O95081 481 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 CST3P01034 146 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 PABPC1P11940 636 aaKnown RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 GOT1P17174 413 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 COL8A1P27658 744 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SLC8A1P32418 973 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 CTSOP43234 321 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 UQCRFS1P47985 274 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 POLE2P56282 527 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 RELBQ01201 579 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 ZNF177Q13360 481 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 CDKN3Q16667 212 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ME3Q16798 604 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 HNRNPA1L2Q32P51 320 aaKnown RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 MANEAQ5SRI9 462 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 C9orf64Q5T6V5 341 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 MBLAC2Q68D91 279 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 CRTC1Q6UUV9 634 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SV2AQ7L0J3 742 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ZNF720Q7Z2F6 126 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 EFL1Q7Z2Z2 1120 aaKnown RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 SCD5Q86SK9 330 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 DENND1CQ8IV53 801 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 MMAAQ8IVH4 418 aaKnown RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 AHI1Q8N157 1196 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ZNF276Q8N554 614 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 TMEM145Q8NBT3 493 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 OR14C36Q8NHC7 312 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SSC4DQ8WTU2 575 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 FAM131CQ96AQ9 280 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 HVCN1Q96D96 273 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
XRN1-212ENST00000486211 OMDQ99983 421 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 CBWD1Q9BRT8 395 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SLC12A9Q9BXP2 914 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 ZHX3Q9H4I2 956 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 BLOC1S4Q9NUP1 217 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SEL1LQ9UBV2 794 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 CYTH4Q9UIA0 394 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 GGA2Q9UJY4 613 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 DMTF1Q9Y222 760 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.03
XRN1-212ENST00000486211 RP1P56715 2156 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 A1L4Q6 167 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 CDC14CA4D256 554 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 EME2A4GXA9 379 aaPredicted RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 MTSS1O43312 755 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 NEBLO76041 1014 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 LDHAP00338 332 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 TNNC2P02585 160 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 HMBSP08397 361 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 ALPPL2P10696 532 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 GARTP22102 1010 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 GRNP28799 593 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 MAT2AP31153 395 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 DRD3P35462 400 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 UGT1A5P35504 534 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 DDIT3P35638 169 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 OXCT1P55809 520 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 MAP3K7CLP57077 242 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 RAB15P59190 212 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 STAT4Q14765 748 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 CRYBG3Q68DQ2 2970 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 BORAQ6PGQ7 559 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
XRN1-212ENST00000486211 RSRC2Q7L4I2 434 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 B3GNT8Q7Z7M8 397 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 PRPF39Q86UA1 669 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 SVOPQ8N4V2 548 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 WFDC5Q8TCV5 224 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 KLHDC7BQ96G42 594 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 LMLNQ96KR4 655 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 MRGPRX3Q96LB0 322 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 MED10Q9BTT4 135 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 DUSP23Q9BVJ7 150 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 R3HCC1Q9Y3T6 440 aaKnown RBP8.58□□□□□ -1.04
XRN1-212ENST00000486211 TDRD6O60522 2096 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 324.8 ms