RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ARHGAP17Q68EM7 881 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 KLHDC10Q6PID8 442 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 C11orf74Q86VG3 221 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 LRRC57Q8N9N7 239 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 RBBP8NLQ8NC74 664 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 MSANTD4Q8NCY6 345 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 CLEC4CQ8WTT0 213 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TFAP2BQ92481 460 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PIWIL1Q96J94 861 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 SELENOOQ9BVL4 669 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 SCNM1Q9BWG6 230 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TLR10Q9BXR5 811 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 NUSAP1Q9BXS6 441 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PACSIN1Q9BY11 444 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 CAPN10Q9HC96 672 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PNPLA8Q9NP80 782 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 MARCH2Q9P0N8 246 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 UVRAGQ9P2Y5 699 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 LCMT1Q9UIC8 334 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 KLK13Q9UKR3 277 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TSPAN16Q9UKR8 245 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 CNOT1A5YKK6 2376 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ASPMQ8IZT6 3477 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CCDC151A5D8V7 595 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 YJEFN3A6XGL0 299 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CYSRT1A8MQ03 144 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MIF4GDA9UHW6 222 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 E7ENQ6 273 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MSI1O43347 362 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 BUB1O43683 1085 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ERLIN1O75477 346 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 FTLP02792 175 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 PNMA6AP0CW24 399 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 KRT5P13647 590 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CEACAM1P13688 526 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 LCP1P13796 627 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CD59P13987 128 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CHRNB2P17787 502 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CSRP1P21291 193 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 RGS7P49802 495 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 EMP3P54852 163 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 FMO1Q01740 532 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 SEMA3BQ13214 749 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF234Q14588 700 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 DUOXA1Q1HG43 343 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 GLE1Q53GS7 698 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ACAD10Q6JQN1 1059 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 C11orf63Q6NUN7 778 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 PEX26Q7Z412 305 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 TRMT11Q7Z4G4 463 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 NOP9Q86U38 636 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CREG2Q8IUH2 290 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 RGL4Q8IZJ4 473 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MMGT1Q8N4V1 131 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF276Q8N554 614 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MINDY1Q8N5J2 469 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 UBR7Q8N806 425 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ANKRD52Q8NB46 1076 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 WFDC5Q8TCV5 224 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MYEOVQ96EZ4 313 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 EPAS1Q99814 870 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 GPR174Q9BXC1 333 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 MTG2Q9H4K7 406 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 IL21RQ9HBE5 538 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 SEPT11Q9NVA2 429 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 CLIC5Q9NZA1 410 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 THAP10Q9P2Z0 257 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 AMFRQ9UKV5 643 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 RAB21Q9UL25 225 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 ZMIZ1Q9ULJ6 1067 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC6A14Q9UN76 642 aa9.73□□□□□ -0.85
TMEM39A-208ENST00000486159 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SH3BP5O60239 455 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 ZBED1O96006 694 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 CYP1A2P05177 515 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PROS1P07225 676 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 CD19P15391 556 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 NUMBP49757 651 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 COPAP53621 1224 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 COG7P83436 770 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 BNC1Q01954 994 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 ADIGQ0VDE8 80 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 LMAN2Q12907 356 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 BYSLQ13895 437 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PPP2R5EQ16537 467 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 CLEC16AQ2KHT3 1053 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 BSPRYQ5W0U4 402 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PM20D1Q6GTS8 502 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SDE2Q6IQ49 451 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PMF1Q6P1K2 205 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC36A4Q6YBV0 504 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 FAM124AQ86V42 546 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms