RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 E2F7Q96AV8 911 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ELSPBP1Q96BH3 223 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ASIC4Q96FT7 647 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PEBP4Q96S96 227 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 SNRNP25Q9BV90 132 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 TRMT61BQ9BVS5 477 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 ZCCHC2Q9C0B9 1178 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 BRD9Q9H8M2 597 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KCNK12Q9HB15 430 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ANLNQ9NQW6 1124 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 VANGL2Q9ULK5 521 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 USP18Q9UMW8 372 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PACSIN2Q9UNF0 486 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 AP4E1Q9UPM8 1137 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 HS3ST4Q9Y661 456 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ALG6Q9Y672 507 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 CAPN6Q9Y6Q1 641 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 COL4A2P08572 1712 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 HELZP42694 1942 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 A0A0A6YYK5 440 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 TYW5A2RUC4 315 aaKnown RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 GRID2IPA4D2P6 1211 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 BTNL10A8MVZ5 291 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 KCNU1A8MYU2 1149 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ANHXE9PGG2 379 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 NEDD8-MDP1E9PL57 170 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PI4K2BG5E9Z4 385 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 I6L893 689 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 SLC9A3R1O14745 358 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 DAPK3O43293 454 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 TBL1XO60907 577 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PAGE1O75459 146 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ECI2O75521 394 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 KRT1P04264 644 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CYBBP04839 570 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 SLC2A3P11169 496 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 IL1R2P27930 398 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 WEE1P30291 646 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 SLC6A4P31645 630 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ADRA1BP35368 520 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 SOX9P48436 509 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 SGSHP51688 502 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CDH6P55285 790 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 RING1Q06587 406 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 RUNX3Q13761 415 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 PPP2R5DQ14738 602 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 NR6A1Q15406 480 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CA9Q16790 459 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 MS4A13Q5J8X5 152 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ZNF569Q5MCW4 686 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 LY6G5CQ5SRR4 150 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ERMARDQ5T6L9 678 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PIK3R6Q5UE93 754 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ZNF468Q5VIY5 522 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 TXNRD3NBQ6F5E7 133 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 NADSYN1Q6IA69 706 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 LRRC31Q6UY01 552 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 HTR3DQ70Z44 454 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PEX26Q7Z412 305 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 TMEM25Q86YD3 366 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CCDC50Q8IVM0 306 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 REXO1L1PQ8IX06 675 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 RHOT1Q8IXI2 618 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 GJD3Q8N144 294 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CCAR2Q8N163 923 aaKnown RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 CARNMT1Q8N4J0 409 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 NETO2Q8NC67 525 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 KCTD6Q8NC69 237 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 OSCP1Q8WVF1 389 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CENPIQ92674 756 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 NT5C3BQ969T7 300 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 MYEOVQ96EZ4 313 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PGAP3Q96FM1 320 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 BTN2A3PQ96KV6 586 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 RPRD1AQ96P16 312 aaPredicted RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 ALS2CR12Q96Q35 445 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 DDX50Q9BQ39 737 aaKnown RBP5.81□□□□□ -1.48
COPS3-208ENST00000486032 BBS2Q9BXC9 721 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 TRPV4Q9HBA0 871 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.81□□□□□ -1.48
COPS3-208ENST00000486032 ARHGEF38Q9NXL2 777 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 OBP2AQ9NY56 170 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 GTSE1Q9NYZ3 720 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 IGSF9Q9P2J2 1179 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 TBC1D14Q9P2M4 693 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 AMFRQ9UKV5 643 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 FZD10Q9ULW2 581 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 CA14Q9ULX7 337 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 ZNF510Q9Y2H8 683 aa5.81□□□□□ -1.48
COPS3-208ENST00000486032 TECTAO75443 2155 aa5.8□□□□□ -1.48
COPS3-208ENST00000486032 MYO10Q9HD67 2058 aa5.8□□□□□ -1.48
COPS3-208ENST00000486032 MYOFQ9NZM1 2061 aa5.8□□□□□ -1.48
COPS3-208ENST00000486032 LRRD1A4D1F6 860 aa5.8□□□□□ -1.48
COPS3-208ENST00000486032 E9PAM4 449 aa5.8□□□□□ -1.48
COPS3-208ENST00000486032 FAM72CH0Y354 149 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms