RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 C2CD4BA6NLJ0 364 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 LRRC53A6NM62 1247 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 SIGLEC16A6NMB1 481 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DRGXA6NNA5 263 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NEDD8-MDP1E9PL57 170 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.46
CUX1-208ENST00000485792 CDK2AP1O14519 115 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DCLK1O15075 740 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TIMM44O43615 452 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 APODP05090 189 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 SLC2A3P11169 496 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 CDK11BP21127 795 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 PRKCHP24723 683 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 CD70P32970 193 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 USP8P40818 1118 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 PTPN9P43378 593 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 HARS2P49590 506 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 MRE11P49959 708 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TBX4P57082 545 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 SNX16P57768 344 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RPS24P62847 133 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 FANCCQ00597 558 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 CSTF1Q05048 431 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 MTA1Q13330 715 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DMC1Q14565 340 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 EIF4HQ15056 248 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 CLEC16AQ2KHT3 1053 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.92□□□□□ -1.463e-14■□□□□ 9.1
CUX1-208ENST00000485792 MPPE1Q53F39 396 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 MS4A13Q5J8X5 152 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 FAM182AQ5T1J6 154 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ACBD5Q5T8D3 534 aaPredicted RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 MANEALQ5VSG8 457 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NAA35Q5VZE5 725 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 WDR59Q6PJI9 974 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 LRSAM1Q6UWE0 723 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TPGS1Q6ZTW0 290 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RSRC2Q7L4I2 434 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 ZNF571Q7Z3V5 609 aaPredicted RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 LONP2Q86WA8 852 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ERICH1Q86X53 443 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DRC7Q8IY82 874 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ZNF295-AS1Q8N0V1 137 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 DCLK2Q8N568 766 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NAT16Q8N8M0 369 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 KDM1BQ8NB78 822 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 MDGA1Q8NFP4 955 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NEK11Q8NG66 645 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RPLP0P6Q8NHW5 317 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RNF139Q8WU17 664 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 CPA5Q8WXQ8 436 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ATOH1Q92858 354 aaPredicted RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 IGSF8Q969P0 613 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TTC17Q96AE7 1141 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 IQCDQ96DY2 449 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TMA16Q96EY4 203 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 ALG14Q96F25 216 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ZNF419Q96HQ0 510 aaPredicted RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 MRGPRX3Q96LB0 322 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NOX5Q96PH1 765 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 XPO6Q96QU8 1125 aaKnown RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 PEBP4Q96S96 227 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 AGPAT1Q99943 283 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 BBS2Q9BXC9 721 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NACA2Q9H009 215 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ISCUQ9H1K1 167 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 TMEM245Q9H330 911 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ARHGEF4Q9NR80 690 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ST7Q9NRC1 585 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RXFP3Q9NSD7 469 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 NDFIP2Q9NV92 336 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 THAP10Q9P2Z0 257 aaPredicted RBP5.92□□□□□ -1.46
CUX1-208ENST00000485792 TBC1D30Q9Y2I9 924 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 OR51B4Q9Y5P0 310 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ACTL7AQ9Y615 435 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 RAD54BQ9Y620 910 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 ITIH6Q6UXX5 1313 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 SCN8AQ9UQD0 1980 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CXorf51AA0A1B0GTR3 108 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FIGNL2A6NMB9 653 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FAM72CH0Y354 149 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CNTN5O94779 1100 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ADCY5O95622 1261 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 F9P00740 461 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 IGLV3-19P01714 112 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 TPM2P07951 284 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 VAV1P15498 845 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FERP16591 822 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 NTSR1P30989 418 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CCR1P32246 355 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 IL12RB1P42701 662 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FNTBP49356 437 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 DGKGP49619 791 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 DGKEP52429 567 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CDK17Q00537 523 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 SCAPQ12770 1279 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 C15orf59Q2T9L4 293 aaPredicted RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 ASTE1Q2TB18 679 aaPredicted RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 CCDC14Q49A88 953 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms