RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
PTCD1-205ENST00000485746 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 CACNA1HO95180 2353 aa12.87□□□□□ -0.35
PTCD1-205ENST00000485746 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 EDDM13A0A1B0GTR0 161 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 BCLAF3A2AJT9 711 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 DRGXA6NNA5 263 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 CCP110O43303 1012 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 MYBL1P10243 752 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 CASP14P31944 242 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 COPAP53621 1224 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ARHGAP8P85298 464 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SFSWAPQ12872 951 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TRIM14Q14142 442 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 C5orf22Q49AR2 442 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 RAB6CQ53S08 254 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ALFQ53S48 1182 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 EFHC2Q5JST6 749 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SYCP2LQ5T4T6 812 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 LYSMD4Q5XG99 296 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 CXorf57Q6NSI4 855 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 PRR23CQ6ZRP0 262 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 FAM124AQ86V42 546 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 DNAAF5Q86Y56 855 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 RGL4Q8IZJ4 473 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 TOE1Q96GM8 510 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SYT11Q9BT88 431 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SPON2Q9BUD6 331 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 RAB6CQ9H0N0 254 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 OSBPL2Q9H1P3 480 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 MTG2Q9H4K7 406 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ITM2CQ9NQX7 267 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 VPS45Q9NRW7 570 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 NCKAP1Q9Y2A7 1128 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
PTCD1-205ENST00000485746 SCINQ9Y6U3 715 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
PTCD1-205ENST00000485746 BNIP3LO60238 219 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SIN3BO75182 1162 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 RNF8O76064 485 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 GYPCP04921 128 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SDHBP21912 280 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 DPP6P42658 865 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 ID4P47928 161 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 STK19P49842 368 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 TPMTP51580 245 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 PLK1P53350 603 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 HDAC4P56524 1084 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SPDYCQ5MJ68 293 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 CCDC185Q8N715 623 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 CENPIQ92674 756 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 GPR174Q9BXC1 333 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 MRPL47Q9HD33 250 aaKnown RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 SLCO3A1Q9UIG8 710 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 TBC1D30Q9Y2I9 924 aa12.85□□□□□ -0.35
PTCD1-205ENST00000485746 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-205ENST00000485746 IGLV3-10A0A075B6K4 115 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 TCRBV5S1A1TA0A578 114 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 MEI4A8MW99 385 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 I6L893 689 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 CREB3O43889 395 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 PTGER3P43115 390 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 RPS14P62263 151 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 ZBTB16Q05516 673 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF33AQ06730 810 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms