RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CHPFQ8IZ52 775 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 DCLK2Q8N568 766 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 UBL4BQ8N7F7 174 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 KDM1BQ8NB78 822 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 HSPH1Q92598 858 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 MAGEH1Q9H213 219 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CHRDQ9H2X0 955 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 OSGEPQ9NPF4 335 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ABCB8Q9NUT2 735 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 SUN2Q9UH99 717 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 XPO7Q9UIA9 1087 aaKnown RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 SLC25A13Q9UJS0 675 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 VPS28Q9UK41 221 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 TBC1D30Q9Y2I9 924 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 TICRRQ7Z2Z1 1910 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 GOLGA6L9A6NEM1 432 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 WASH4PA8MWX3 477 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF487B1APH4 448 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 PSTPIP1O43586 416 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RAMP2O60895 175 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RNASEH1O60930 286 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RNF40O75150 1001 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZRANB2O95218 330 aaKnown RBP eCLIP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 EGFP01133 1207 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 SRPRAP08240 638 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 DLDP09622 509 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 HNRNPLP14866 589 aaKnown RBP eCLIP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 COMTP21964 271 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 NTSR1P30989 418 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 DGKEP52429 567 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 NDST2P52849 883 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 CDH6P55285 790 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 BYSLQ13895 437 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 PUM1Q14671 1186 aaKnown RBP eCLIP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 POLD3Q15054 466 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 DPYSL2Q16555 572 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 PARP15Q460N3 678 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 FNDC3BQ53EP0 1204 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 C2orf27AQ580R0 203 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TMCO4Q5TGY1 634 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RNF43Q68DV7 783 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 IL31Q6EBC2 164 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TMCO3Q6UWJ1 677 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF662Q6ZS27 426 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 VSIG1Q86XK7 387 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF354CQ86Y25 554 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TMEM139Q8IV31 216 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RCOR2Q8IZ40 523 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 CAMKK1Q8N5S9 505 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF513Q8N8E2 541 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 RTL3Q8N8U3 475 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ACRBPQ8NEB7 543 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 NSMCE1Q8WV22 266 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 IGSF8Q969P0 613 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TTC17Q96AE7 1141 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 CCDC114Q96M63 670 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 PRICKLE1Q96MT3 831 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 FEM1AQ9BSK4 669 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 SPON2Q9BUD6 331 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 SNRNP25Q9BV90 132 aaKnown RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 CALN1Q9BXU9 219 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 FAM126AQ9BYI3 521 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TRIM7Q9C029 511 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 FBRSQ9HAH7 460 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 POLMQ9NP87 494 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-208ENST00000485618 TMEM248Q9NWD8 314 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 NCDNQ9UBB6 729 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 AMFRQ9UKV5 643 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 ALG6Q9Y672 507 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 GVINP1Q7Z2Y8 2422 aa8.49□□□□□ -1.05
SF3A1-208ENST00000485618 MIA3Q5JRA6 1907 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 MACROD2A1Z1Q3 448 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 CCDC66A2RUB6 948 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 ARHGAP42A6NI28 874 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 MIF4GDA9UHW6 222 aaKnown RBP8.48□□□□□ -1.05
SF3A1-208ENST00000485618 K7EQS6 105 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 BUB1BO60566 1050 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF189O75820 626 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-208ENST00000485618 KLF8O95600 359 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-208ENST00000485618 RARAP10276 462 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 MX2P20592 715 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 HLA-FP30511 346 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 TIE1P35590 1138 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 CSKP41240 450 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 RECQLP46063 649 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-208ENST00000485618 CLCN6P51797 869 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 SEC13P55735 322 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 GNA12Q03113 381 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 ZNF252P-AS1Q0IIN9 211 aa8.48□□□□□ -1.05
SF3A1-208ENST00000485618 CCDC15Q0P6D6 951 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms