RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 CFIP05156 583 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 KRT3P12035 628 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 VAV1P15498 845 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 TNFAIP3P21580 790 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 MAOBP27338 520 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 RPS14P62263 151 aaKnown RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 TPM4P67936 248 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 ECT2LQ008S8 904 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 ZNF177Q13360 481 aaPredicted RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 NR1I3Q14994 352 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 HNRNPA1L2Q32P51 320 aaKnown RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 TRIM61Q5EBN2 209 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 BNIPLQ7Z465 357 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 TFAP2DQ7Z6R9 452 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 SYT12Q8IV01 421 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 ZNF683Q8IZ20 524 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 RGL4Q8IZJ4 473 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 MAGEB5Q9BZ81 275 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 MUC3BQ9H195 1237 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 WSB2Q9NYS7 404 aaPredicted RBP12.64□□□□□ -0.39
MSH5-216ENST00000484309 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
MSH5-216ENST00000484309 MEI4A8MW99 385 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 E9PAM4 449 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SLC30A4O14863 429 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 FOXD2O60548 495 aaPredicted RBP12.63□□□□□ -0.39
MSH5-216ENST00000484309 CLDN11O75508 207 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 DNTTP04053 509 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 RHOCP08134 193 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SRPRAP08240 638 aaKnown RBP12.63□□□□□ -0.39
MSH5-216ENST00000484309 CCDC172P0C7W6 258 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SKILP12757 684 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 GPD1P21695 349 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 CDH4P55283 916 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 IRX4P78413 519 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 MTA1Q13330 715 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SLC12A1Q13621 1099 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 C5orf22Q49AR2 442 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 STPG1Q5TH74 334 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SFMBT2Q5VUG0 894 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
MSH5-216ENST00000484309 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 LRRC31Q6UY01 552 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 ARCQ7LC44 396 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
MSH5-216ENST00000484309 CCDC185Q8N715 623 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 ALG14Q96F25 216 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 FEM1AQ9BSK4 669 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 RTKNQ9BST9 563 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 SYT11Q9BT88 431 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 VPS28Q9UK41 221 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 PILRBQ9UKJ0 227 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
MSH5-216ENST00000484309 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 EDDM13A0A1B0GTR0 161 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 CCP110O43303 1012 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 SNAP91O60641 907 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 ENDOD1O94919 500 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 SDHBP21912 280 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 RRM1P23921 792 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 ACSL1P33121 698 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 PTPN9P43378 593 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 MAPK8P45983 427 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 PSMD8P48556 350 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 PLK1P53350 603 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 HDAC4P56524 1084 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 UBASH3AP57075 661 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 SPDYCQ5MJ68 293 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 ARTNQ5T4W7 220 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 C9orf64Q5T6V5 341 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 DCAF12L1Q5VU92 463 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 ZNF571Q7Z3V5 609 aaPredicted RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 MMAAQ8IVH4 418 aaKnown RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 GANCQ8TET4 914 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 SNX19Q92543 992 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
MSH5-216ENST00000484309 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
MSH5-216ENST00000484309 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms