RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ARHGEF38Q9NXL2 777 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.45■□□□□ 0.86
HPS4-213ENST00000483631 SLCO3A1Q9UIG8 710 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 HS3ST4Q9Y661 456 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 DOCK4Q8N1I0 1966 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 SYNJ2BP-COX16A0A087WUM0 186 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.44■□□□□ 0.86
HPS4-213ENST00000483631 SPAARA0A1B0GVQ0 90 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 LRRC72A6NJI9 287 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 C10orf142B7Z368 130 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 PES1O00541 588 aaKnown RBP20.44■□□□□ 0.86
HPS4-213ENST00000483631 SH3BP5O60239 455 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 PDGFRAP16234 1089 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 C5AR1P21730 350 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 CXCR3P49682 368 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 CDH4P55283 916 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 BNC1Q01954 994 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 NME3Q13232 169 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 ZNF177Q13360 481 aaPredicted RBP20.44■□□□□ 0.86
HPS4-213ENST00000483631 TRIP6Q15654 476 aaKnown RBP20.44■□□□□ 0.86
HPS4-213ENST00000483631 HLA-BQ31612 363 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 KIAA0895LQ68EN5 471 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 RBM43Q6ZSC3 357 aaKnown RBP20.44■□□□□ 0.86
HPS4-213ENST00000483631 SND1Q7KZF4 910 aaKnown RBP eCLIP20.44■□□□□ 0.86
HPS4-213ENST00000483631 GLRX5Q86SX6 157 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 ERICH1Q86X53 443 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 ZNF677Q86XU0 584 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 IGSF8Q969P0 613 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 ALG14Q96F25 216 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 SPAG5Q96R06 1193 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 SCNM1Q9BWG6 230 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 WDCPQ9H6R7 721 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 TM9SF3Q9HD45 589 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 COX16Q9P0S2 106 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 PCDHB9Q9Y5E1 797 aa20.44■□□□□ 0.86
HPS4-213ENST00000483631 FAM221BA6H8Z2 402 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 TMEM8BA6NDV4 472 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 F8VZ95 297 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 MID1O15344 667 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 PAGE1O75459 146 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 FSBPO95073 299 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 MZF1P28698 734 aaPredicted RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 SLC8A1P32418 973 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 GALCP54803 685 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 RACK1P63244 317 aaKnown RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 SLC25A52Q3SY17 297 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 HSP90AA4PQ58FG1 418 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 OTUD1Q5VV17 481 aaPredicted RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 LRSAM1Q6UWE0 723 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 UNQ6494/PRO21346Q6UXR6 183 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 MMAAQ8IVH4 418 aaKnown RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 OR2T34Q8NGX1 318 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 GANCQ8TET4 914 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 FRS2Q8WU20 508 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 FAM131CQ96AQ9 280 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 RPL10LQ96L21 214 aaKnown RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 C1orf74Q96LT6 269 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 OMDQ99983 421 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 ORAI3Q9BRQ5 295 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 FEM1AQ9BSK4 669 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 TMEM121BQ9BXQ6 578 aaPredicted RBP20.43■□□□□ 0.86
HPS4-213ENST00000483631 TM7SF3Q9NS93 570 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 PIGVQ9NUD9 493 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 VANGL2Q9ULK5 521 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 TMEM131Q92545 1883 aa20.43■□□□□ 0.86
HPS4-213ENST00000483631 A0A1B0GVT2 93 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 A0A1W2PP55 124 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 A0A1W2PPC4 97 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 ALOX15BO15296 676 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 FLRT2O43155 660 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 ATP9BO43861 1147 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 DFNA5O60443 496 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 CBFA2T3O75081 653 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 IGHV4-34P06331 123 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 TPM2P07951 284 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 GOT1P17174 413 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 CSNK1EP49674 416 aaKnown RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 CCR5P51681 352 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 SUZ12Q15022 739 aaKnown RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 FAM102AQ5T9C2 384 aaPredicted RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 CDKAL1Q5VV42 579 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 DSG4Q86SJ6 1040 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 CIR1Q86X95 450 aaPredicted RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 XYLT1Q86Y38 959 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 KDF1Q8NAX2 398 aaPredicted RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 EPS8L1Q8TE68 723 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 NEUROG2Q9H2A3 272 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 SERGEFQ9UGK8 458 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 SLC25A13Q9UJS0 675 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 ANKRD6Q9Y2G4 727 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 MSRB2Q9Y3D2 182 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 OR51B4Q9Y5P0 310 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 TP53BP1Q12888 1972 aaPredicted RBP20.42■□□□□ 0.86
HPS4-213ENST00000483631 IGF2RP11717 2491 aa20.42■□□□□ 0.86
HPS4-213ENST00000483631 PLXNA2O75051 1894 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 SLC7A4O43246 635 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 RNASEH2AO75792 299 aaKnown RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 STK19P49842 368 aaPredicted RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 SULT1E1P49888 294 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms