RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PDLIM4P50479 330 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 POLE2P56282 527 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 TAS2R50P59544 299 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ABATP80404 500 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 RPL36AP83881 106 aaKnown RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 CRYZQ08257 329 aaKnown RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 Q0VFX4 171 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 IFIT5Q13325 482 aaKnown RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 GPR18Q14330 331 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 KRTAP27-1Q3LI81 207 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 COBLL1Q53SF7 1204 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ALG10Q5BKT4 473 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ARL13AQ5H913 290 aaPredicted RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ALG10BQ5I7T1 473 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 FAM209BQ5JX69 171 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 RTL10Q7L3V2 364 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 CUZD1Q86UP6 607 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ENGASEQ8NFI3 743 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 GABPB2Q8TAK5 448 aaPredicted RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 RPS6KC1Q96S38 1066 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 POLDIP3Q9BY77 421 aaKnown RBP3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZNF304Q9HCX3 659 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 STARD7Q9NQZ5 370 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 PLSCR4Q9NRQ2 329 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 HELLSQ9NRZ9 838 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 COMMD10Q9Y6G5 202 aa3.45□□□□□ -1.86
LAPTM4A-202ENST00000483117 CLEC18AA5D8T8 446 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 I6L893 689 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 SPRY3O43610 288 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 NTSR2O95665 410 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 KRT18P05783 430 aaKnown RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 MYL3P08590 195 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 TNFSF4P23510 183 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 GNALP38405 381 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 RASSF2P50749 326 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 FOXL2P58012 376 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 RPL15P61313 204 aaKnown RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 SETQ01105 290 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 IZUMO4Q1ZYL8 232 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 FNBP1LQ5T0N5 605 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 CADM3Q8N126 398 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 SLC25A41Q8N5S1 370 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 CLEC18CQ8NCF0 446 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 WFIKKN2Q8TEU8 576 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZNF566Q969W8 418 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 WDR77Q9BQA1 342 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 NAA15Q9BXJ9 866 aaKnown RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 C6orf106Q9H6K1 298 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 RMI1Q9H9A7 625 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 PNRC2Q9NPJ4 139 aaKnown RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 PLEKHB1Q9UF11 243 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 TRPC5Q9UL62 973 aaPredicted RBP3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 CA14Q9ULX7 337 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 SLC12A4Q9UP95 1085 aa3.44□□□□□ -1.86
LAPTM4A-202ENST00000483117 A0A087WYN8 130 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 APAF1O14727 1248 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 PMM2O15305 246 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 RPP40O75818 363 aaKnown RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 FGF18O76093 207 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 IGKV3-20P01619 116 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 ANXA6P08133 673 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 EEF1GP26641 437 aaKnown RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 KLRK1P26718 216 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 GRK5P34947 590 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 COMPP49747 757 aaPredicted RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 PMS2P54278 862 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 GAS1P54826 345 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 FAM3BP58499 235 aaPredicted RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 RHBDL3P58872 404 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 SELENOVP59797 346 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 TLE3Q04726 772 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 UBE4AQ14139 1066 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 SAFBQ15424 915 aaKnown RBP eCLIP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 RAB30Q15771 203 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 C9orf50Q5SZB4 431 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 DCAF12L2Q5VW00 463 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 TMEM88Q6PEY1 159 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 PRSS57Q6UWY2 283 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 FAM83HQ6ZRV2 1179 aaPredicted RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 TRABD2AQ86V40 505 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 FAM217AQ8IXS0 508 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 SAMD3Q8N6K7 520 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 KDM1BQ8NB78 822 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 ADAMTS14Q8WXS8 1223 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 REXO5Q96IC2 774 aaKnown RBP3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 TM6SF1Q9BZW5 370 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 FZD10Q9ULW2 581 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 PCDHGB1Q9Y5G3 927 aa3.43□□□□□ -1.86
LAPTM4A-202ENST00000483117 C3orf70A6NLC5 250 aaPredicted RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 KCNJ18B7U540 433 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 KIF28PB7ZC32 967 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 MCIDASD6RGH6 385 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 SH3BP5O60239 455 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CAMTA2O94983 1202 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 LCKP06239 509 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CHRNA5P30532 468 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 TNFSF8P32971 234 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 SLC16A2P36021 539 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms