RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 ZNF280BQ86YH2 543 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 D2HGDHQ8N465 521 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 FBXO18Q8NFZ0 1043 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 PRPF31Q8WWY3 499 aaKnown RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 PSPC1Q8WXF1 523 aaKnown RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 RSPH1Q8WYR4 309 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 KAT5Q92993 513 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 GTF3C6Q969F1 213 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 TMEM143Q96AN5 459 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 MVB12AQ96EY5 273 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 RPGRIP1Q96KN7 1286 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 CEP170P1Q96L14 293 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 MRGPRX4Q96LA9 322 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 APOL5Q9BWW9 433 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 LSM14BQ9BX40 385 aaKnown RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 MRPL9Q9BYD2 267 aaKnown RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 ZBP1Q9H171 429 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 LDAHQ9H6V9 325 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 XPNPEP1Q9NQW7 623 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 TDP1Q9NUW8 608 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 DNAJB4Q9UDY4 337 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 PCDHB2Q9Y5E7 798 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 ARID1BQ8NFD5 2236 aaPredicted RBP5.45□□□□□ -1.54
PRKCB-206ENST00000482000 NOTCH4Q99466 2003 aa5.45□□□□□ -1.54
PRKCB-206ENST00000482000 MYH15Q9Y2K3 1946 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 TMEM221A6NGB7 291 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 BTBD18B2RXH4 712 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 M0R296 226 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 AP1G1O43747 822 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 MARCH6O60337 910 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 TSPAN1O60635 241 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 DKC1O60832 514 aaKnown RBP eCLIP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 DDHD2O94830 711 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 SLITRK3O94933 977 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 LYPLA2O95372 231 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 CTSAP10619 480 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 HOXB8P17481 243 aaPredicted RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 XBP1P17861 261 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 DDCP20711 480 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 FPR1P21462 350 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 KRT2P35908 639 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 SLC11A1P49279 550 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ZXDAP98168 799 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 NHLH1Q02575 133 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 CTTNQ14247 550 aaKnown RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ZNF267Q14586 743 aaPredicted RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 SMC1AQ14683 1233 aaKnown RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 EMC2Q15006 297 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ANKRD1Q15327 319 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ELAVL1Q15717 326 aaKnown RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 CSRP2Q16527 193 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 PGS1Q32NB8 556 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ANKS6Q68DC2 871 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 NCAPH2Q6IBW4 605 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 SRGAP1Q7Z6B7 1085 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 C14orf80Q86SX3 495 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 XYLT1Q86Y38 959 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 DRC7Q8IY82 874 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ELOA2Q8IYF1 753 aaPredicted RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 VPS52Q8N1B4 723 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 TTC9BQ8N6N2 239 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 RNF149Q8NC42 400 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 MDGA1Q8NFP4 955 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 IFI44Q8TCB0 444 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 SLC22A17Q8WUG5 538 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 CLIP3Q96DZ5 547 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 IGSF21Q96ID5 467 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 CLPTM1LQ96KA5 538 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 MTMR9Q96QG7 549 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 NAP1L4Q99733 375 aaKnown RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 HSD17B14Q9BPX1 270 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 EIF2AK1Q9BQI3 630 aaKnown RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 JPH2Q9BR39 696 aaPredicted RBP5.44□□□□□ -1.54
PRKCB-206ENST00000482000 POMKQ9H5K3 350 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 PCDHA12Q9UN75 941 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
PRKCB-206ENST00000482000 ANK1P16157 1881 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 CXorf49A8MYA2 514 aaPredicted RBP5.43□□□□□ -1.54
PRKCB-206ENST00000482000 C2CD4DB7Z1M9 353 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 K7ESM1 405 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 INPPL1O15357 1258 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 ASAP2O43150 1006 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 PJA2O43164 708 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 NEMFO60524 1076 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 MFAP3LO75121 409 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 CXCL14O95715 111 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 WEE2P0C1S8 567 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 SRGAP2BP0DMP2 458 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 EPCAMP16422 314 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 GLRA2P23416 452 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 SP100P23497 879 aaPredicted RBP5.43□□□□□ -1.54
PRKCB-206ENST00000482000 ARL2P36404 184 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 RARRES1P49788 294 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 PTENP60484 403 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 CTXN1P60606 82 aa5.43□□□□□ -1.54
PRKCB-206ENST00000482000 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms