RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 TRAPPC11Q7Z392 1133 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
LRCH3-216ENST00000481048 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 ARL14EPQ8N8R7 260 aaPredicted RBP6.86□□□□□ -1.31
LRCH3-216ENST00000481048 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 LINC00301Q8NCQ3 95 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 MYCBPAPQ8TBZ2 947 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 OVCA2Q8WZ82 227 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 CHFRQ96EP1 664 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 C8orf48Q96LL4 319 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 USP28Q96RU2 1077 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 FNBP1Q96RU3 617 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 CYP2S1Q96SQ9 504 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 SYT15Q9BQS2 421 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 TRIM9Q9C026 710 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 ARRDC1-AS1Q9H2J1 176 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 MAGEF1Q9HAY2 307 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 FBRSL1Q9HCM7 1045 aaKnown RBP6.86□□□□□ -1.31
LRCH3-216ENST00000481048 VPS45Q9NRW7 570 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 C2orf42Q9NWW7 574 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 TRPM5Q9NZQ8 1165 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 ADAMTS1Q9UHI8 967 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 GGT7Q9UJ14 662 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 MTMR6Q9Y217 621 aa6.86□□□□□ -1.31
LRCH3-216ENST00000481048 FAM208BQ5VWN6 2430 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 A0A087X0B3 334 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PVALEFA0A1B0GWK0 134 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 ZNF840PA6NDX5 716 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 FFAR3O14843 346 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SPTLC2O15270 562 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 CUTAO60888 179 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 YEATS4O95619 227 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 APBB3O95704 486 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 GSTM1P09488 218 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 MSL3P1P0C860 447 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 TNNI1P19237 187 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 BDNFP23560 247 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 LMO2P25791 158 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 KCNC1P48547 511 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 AP3M2P53677 418 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SLC7A9P82251 487 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 CEBPZQ03701 1054 aaKnown RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PLP2Q04941 152 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 DMC1Q14565 340 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PSMD6Q15008 389 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 STK38Q15208 465 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SNRNP35Q16560 246 aaKnown RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PLK5Q496M5 336 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 USP39Q53GS9 565 aaKnown RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SDHAF4Q5VUM1 108 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 ATL3Q6DD88 541 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 FAM173BQ6P4H8 233 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PKN3Q6P5Z2 889 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 EPM2AIP1Q7L775 607 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 HS2ST1Q7LGA3 356 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 KBTBD6Q86V97 674 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 OSTM1Q86WC4 334 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 JAMLQ86YT9 394 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SCN4BQ8IWT1 228 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 C12orf56Q8IXR9 622 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PDILTQ8N807 584 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 XXYLT1Q8NBI6 393 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 OR5B17Q8NGF7 314 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 RPLP0P6Q8NHW5 317 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 TMEM174Q8WUU8 243 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 KBTBD7Q8WVZ9 684 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 OTUB2Q96DC9 234 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PCED1BQ96HM7 432 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 ZNF396Q96N95 335 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SLITRK1Q96PX8 696 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SLC22A12Q96S37 553 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 MMS19Q96T76 1030 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PANK2Q9BZ23 570 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 ELOVL4Q9GZR5 314 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 SNX25Q9H3E2 840 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 TRPC7Q9HCX4 862 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 COMMD8Q9NX08 183 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 TBC1D14Q9P2M4 693 aa6.85□□□□□ -1.31
LRCH3-216ENST00000481048 GOLGA4Q13439 2230 aaKnown RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 BCLAF3A2AJT9 711 aaKnown RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 C2orf78A6NCI8 922 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 LEFTY2O00292 366 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 TGFB1I1O43294 461 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 ATP2C2O75185 946 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 ALDH1A2O94788 518 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 RTN3O95197 1032 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 OLFM2O95897 454 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 OAS1P00973 400 aaKnown RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 PDGFRBP09619 1106 aa6.84□□□□□ -1.31
LRCH3-216ENST00000481048 PTPN1P18031 435 aaKnown RBP6.84□□□□□ -1.31
LRCH3-216ENST00000481048 HOXD13P35453 343 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms