RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 NPY6RQ99463 290 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 ACE2Q9BYF1 805 aaPredicted RBP11.79□□□□□ -0.52
CCM2-213ENST00000480658 TKTL2Q9H0I9 626 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 FBXL12Q9NXK8 326 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 DONSONQ9NYP3 566 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 COX16Q9P0S2 106 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 VPS28Q9UK41 221 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 TBC1D30Q9Y2I9 924 aa11.79□□□□□ -0.52
CCM2-213ENST00000480658 FLRT2O43155 660 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 MAGEC1O60732 1142 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 SIN3BO75182 1162 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 PAGE1O75459 146 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 GRAP2O75791 330 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 CALB1P05937 261 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 GOT1P17174 413 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 SOX5P35711 763 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 CCR5P51681 352 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 GSCP56915 257 aaPredicted RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 GEMIN4P57678 1058 aaKnown RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 RACK1P63244 317 aaKnown RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 NOMO3P69849 1222 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 KRT31Q15323 416 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 TAF5Q15542 800 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 C9orf64Q5T6V5 341 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 PIP4P1Q86T03 277 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 FAM124AQ86V42 546 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 CACUL1Q86Y37 369 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 XYLT1Q86Y38 959 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 OXR1Q8N573 874 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 DEFB119Q8N690 84 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 OR2T34Q8NGX1 318 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 MYO19Q96H55 970 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 PPP1R16AQ96I34 528 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 MRGPRX3Q96LB0 322 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 PCMTD1Q96MG8 357 aaPredicted RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 CDC6Q99741 560 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 FEM1AQ9BSK4 669 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 EIF2B4Q9UI10 523 aaKnown RBP11.78□□□□□ -0.52
CCM2-213ENST00000480658 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 HS3ST2Q9Y278 367 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 HS3ST4Q9Y661 456 aa11.78□□□□□ -0.52
CCM2-213ENST00000480658 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 LGALS16A8MUM7 142 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 ATP9BO43861 1147 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 RNASEH2AO75792 299 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 IL1BP01584 269 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 RHOCP08134 193 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 PDGFRAP16234 1089 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 SDC4P31431 198 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 SLC8A1P32418 973 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 ACSL1P33121 698 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 RECQLP46063 649 aaPredicted RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 AIF1P55008 147 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 C21orf59P57076 290 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 POLR2FP61218 127 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 APBA1Q02410 837 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 KCNMA1Q12791 1236 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 OVGP1Q12889 678 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 FSCBQ5H9T9 825 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 KIAA0895LQ68EN5 471 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 CXorf57Q6NSI4 855 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 RETSATQ6NUM9 610 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 NAXDQ8IW45 347 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 DCAF4L2Q8NA75 395 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 IGSF8Q969P0 613 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 BPIFA3Q9BQP9 254 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 VPS16Q9H269 839 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 DYRK4Q9NR20 520 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 PIGVQ9NUD9 493 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 PPARGC1AQ9UBK2 798 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 INTS6Q9UL03 887 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 MYO6Q9UM54 1294 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.53
CCM2-213ENST00000480658 PCDH15Q96QU1 1955 aa11.77□□□□□ -0.53
CCM2-213ENST00000480658 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 IGLV3-10A0A075B6K4 115 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 A0A1W2PPC4 97 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 LRRC10BA6NIK2 292 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 GJB3O75712 270 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 FSBPO95073 299 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 PRNPP04156 253 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CYP1A1P04798 512 aaPredicted RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 CDK4P11802 303 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 ZNF18P17022 549 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 MMP8P22894 467 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 MZF1P28698 734 aaPredicted RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 OR1E1P30953 314 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CCT8P50990 548 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 JAM2P57087 298 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 RNASE9P60153 205 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms