RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	MRGPRX3	Q96LB0	322 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C1orf74	Q96LT6	269 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CNTNAP3B	Q96NU0	1288 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NPY6R	Q99463	290 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FEM1A	Q9BSK4	669 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CNTNAP3	Q9BZ76	1288 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TKTL2	Q9H0I9	626 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PABPC3	Q9H361	631 aa	Known RBP	12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	DNAAF2	Q9NVR5	837 aa	Known RBP	12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SLCO3A1	Q9UIG8	710 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	VPS28	Q9UK41	221 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PCDHB9	Q9Y5E1	797 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	HS3ST4	Q9Y661	456 aa		12.69	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FAM47DP	A6NHR8	397 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	LRRC72	A6NJI9	287 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	GIPC1	O14908	333 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	RNASEH2A	O75792	299 aa	Known RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FSBP	O95073	299 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CER1	O95813	267 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ADH1B	P00325	375 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MME	P08473	750 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CCDC172	P0C7W6	258 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MZF1	P28698	734 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PML	P29590	882 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SOX5	P35711	763 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CTSO	P43234	321 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	KRT83	P78385	493 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SHC2	P98077	582 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CDR2	Q01850	454 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	UBXN1	Q04323	297 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	GRIK2	Q13002	908 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ELAVL3	Q14576	367 aa	Known RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FAM46C	Q5VWP2	391 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ARC	Q7LC44	396 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CIR1	Q86X95	450 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	XYLT1	Q86Y38	959 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MMAA	Q8IVH4	418 aa	Known RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	EPS8L1	Q8TE68	723 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	IGSF8	Q969P0	613 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NT5C3B	Q969T7	300 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MYO19	Q96H55	970 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MUC3B	Q9H195	1237 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MTG2	Q9H4K7	406 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NLRC4	Q9NPP4	1024 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PIGV	Q9NUD9	493 aa		12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TPX2	Q9ULW0	747 aa	Known RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.68	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TPR	P12270	2363 aa	Known RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NUP205	Q92621	2012 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ITIH6	Q6UXX5	1313 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	MID1	O15344	667 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ADCY5	O95622	1261 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	IL1B	P01584	269 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	GOT1	P17174	413 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C5AR1	P21730	350 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CD27	P26842	260 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PSMD8	P48556	350 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	COPB1	P53618	953 aa	Known RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SIM1	P81133	766 aa	Predicted RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CENPC	Q03188	943 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SUZ12	Q15022	739 aa	Known RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ARL13B	Q3SXY8	428 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ADAT2	Q7Z6V5	191 aa	Known RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	STK40	Q8N2I9	435 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	OR8D1	Q8WZ84	308 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	BIRC7	Q96CA5	298 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CCDC114	Q96M63	670 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	HAPLN3	Q96S86	360 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TBCB	Q99426	244 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	GAN	Q9H2C0	597 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	OSGEP	Q9NPF4	335 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	ARHGEF38	Q9NXL2	777 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	LIMA1	Q9UHB6	759 aa	Known RBP	12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FZD4	Q9ULV1	537 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TBC1D30	Q9Y2I9	924 aa		12.67	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584		A0A1W2PP55	124 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	LGALS16	A8MUM7	142 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SRGAP2	O75044	1071 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	TRIM16	O95361	564 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	RHOC	P08134	193 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NSF	P46459	744 aa	Known RBP	12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CSNK1E	P49674	416 aa	Known RBP	12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	STK19	P49842	368 aa	Predicted RBP	12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	GALC	P54803	685 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C21orf59	P57076	290 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	NOMO3	P69849	1222 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CCDC15	Q0P6D6	951 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	FOXC1	Q12948	553 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C5orf22	Q49AR2	442 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C6orf118	Q5T5N4	469 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	KIAA0895L	Q68EN5	471 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	CXorf57	Q6NSI4	855 aa	Known RBP	12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	C14orf80	Q86SX3	495 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	PIP4P1	Q86T03	277 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	SETD3	Q86TU7	594 aa	Predicted RBP	12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	OR2I1P	Q8NGU4	316 aa		12.66	□□□□□ -0.38
CDK5RAP2-211	ENST00000479584	OR2T34	Q8NGX1	318 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms