RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SERPINA13PQ6UXR4 307 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 MDGA1Q8NFP4 955 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 MYO19Q96H55 970 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 PANX2Q96RD6 677 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 THAP2Q9H0W7 228 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 NHEJ1Q9H9Q4 299 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-217ENST00000479161 TMEM248Q9NWD8 314 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 GVINP1Q7Z2Y8 2422 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF292O60281 2723 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 ABCA7Q8IZY2 2146 aa15.91■□□□□ 0.14
C9orf3-217ENST00000479161 FAM170AA1A519 330 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 PRR23AA6NEV1 266 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 WASH4PA8MWX3 477 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 AKR1B10O60218 316 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 SYNCRIPO60506 623 aaKnown RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF217O75362 1048 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 RPP40O75818 363 aaKnown RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CNTN5O94779 1100 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 LRIG2O94898 1065 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 TMEM253P0C7T8 217 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 GABRG2P18507 467 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CDC25BP30305 580 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ST8SIA6P61647 398 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ZBTB16Q05516 673 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 GFPT1Q06210 699 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 SLC20A2Q08357 652 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 TCEAL1Q15170 157 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ALFQ53S48 1182 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ERMARDQ5T6L9 678 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ALYREFQ86V81 257 aaKnown RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 NLRP14Q86W24 1093 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CCDC170Q8IYT3 715 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ARFGAP1Q8N6T3 406 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CCDC185Q8N715 623 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CTNNBL1Q8WYA6 563 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 MRGPRX3Q96LB0 322 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 CHP1Q99653 195 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 C2orf49Q9BVC5 232 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 TMPRSS4Q9NRS4 437 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 POLR3BQ9NW08 1133 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-217ENST00000479161 IP6K2Q9UHH9 426 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 ERVW-1Q9UQF0 538 aa15.9■□□□□ 0.14
C9orf3-217ENST00000479161 NUP205Q92621 2012 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 SDK1Q7Z5N4 2213 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 WASH3PC4AMC7 463 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 MYO1FO00160 1098 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-217ENST00000479161 SRGAP2O75044 1071 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 LRCH4O75427 683 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 LCA5LO95447 670 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 IGLV3-19P01714 112 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 OR1E1P30953 314 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 NNMTP40261 264 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 P2RY2P41231 377 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 HCAR3P49019 387 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 IRAK1P51617 712 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 KRT83P78385 493 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 SIM2Q14190 667 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-217ENST00000479161 HNRNPA1L2Q32P51 320 aaKnown RBP15.89■□□□□ 0.13
C9orf3-217ENST00000479161 BOLA3Q53S33 107 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 HEATR6Q6AI08 1181 aaKnown RBP15.89■□□□□ 0.13
C9orf3-217ENST00000479161 LAIR1Q6GTX8 287 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 ANO7Q6IWH7 933 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 KIAA1211LQ6NV74 962 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 SCYL2Q6P3W7 929 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 APCDD1Q8J025 514 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 DCAF4L2Q8NA75 395 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 SORCS1Q8WY21 1168 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 TBC1D31Q96DN5 1066 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 MRGPRX1Q96LB2 322 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 PHOX2BQ99453 314 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 EPAS1Q99814 870 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 IMPACTQ9P2X3 320 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 RAB23Q9ULC3 237 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 HS3ST2Q9Y278 367 aa15.89■□□□□ 0.13
C9orf3-217ENST00000479161 THADAQ6YHU6 1953 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 FGF10O15520 208 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-217ENST00000479161 ATP9BO43861 1147 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 PRPSAP2O60256 369 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 LRP3O75074 770 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MTA2O94776 668 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 EPHX1P07099 455 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 RHOCP08134 193 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 PRKCHP24723 683 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MZF1P28698 734 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MIPP30301 263 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 GGCXP38435 758 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MRE11P49959 708 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 CLCN6P51797 869 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 YBEYP58557 167 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
C9orf3-217ENST00000479161 CIR1Q86X95 450 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms